Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RN7SL172P-201ENST00000460535 303 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RN7SL197P-201ENST00000466981 299 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RPL7P6-201ENST00000480903 738 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RN7SL591P-201ENST00000496150 292 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC111193.1-201ENST00000504097 155 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC019322.1-201ENST00000571869 389 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC110743.1-201ENST00000584870 478 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC009237.13-201ENST00000603193 276 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC133552.5-201ENST00000604266 540 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC021766.1-201ENST00000624404 741 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC000095.2-202ENST00000637415 154 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 CASC19-222ENST00000641321 1173 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AL034370.1-201ENST00000397254 1590 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL590763.1-201ENST00000398297 1545 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 RNU6-244P-201ENST00000391028 104 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CCNB2P1-201ENST00000399411 1150 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL133388.1-201ENST00000404509 287 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CBX1P4-201ENST00000439415 457 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 MTND3P4-201ENST00000453537 303 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 DNAJB5P1-201ENST00000454004 806 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 RPS26P39-201ENST00000469206 341 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 OR52A4P-201ENST00000472867 958 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC022133.1-201ENST00000490961 571 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC026616.1-201ENST00000523157 525 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 SETP1-201ENST00000556014 845 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC095055.1-201ENST00000603472 1113 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CR589904.2-201ENST00000612533 440 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC136428.4-201ENST00000634254 1155 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AC004076.2-201ENST00000620532 3323 ntBASIC6.93□□□□□ -1.3
CHMP4AQ9BY43 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AL359955.1-201ENST00000455242 3275 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 MIR133A2-201ENST00000347538 102 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 SNORD115-48-201ENST00000364764 76 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 RNU1-77P-201ENST00000390868 162 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AL158827.1-201ENST00000416300 391 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 CR848007.2-201ENST00000424918 787 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 EEF1A1P1-201ENST00000447052 739 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 MTND5P8-201ENST00000449817 1083 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms