Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AF121897.1-201ENST00000411867 3980 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC005614.1-201ENST00000598952 3653 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AP002800.1-201ENST00000624982 2225 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 OR52B3P-201ENST00000314715 928 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.184-201ENST00000363884 108 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 RNU6-1062P-201ENST00000383908 107 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.395-201ENST00000383945 109 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC009302.1-201ENST00000417147 390 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL645937.1-202ENST00000421799 937 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 FAM96AP1-201ENST00000430879 482 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC234064.1-201ENST00000436312 247 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 HMGB3P12-201ENST00000438745 556 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC079448.1-201ENST00000449377 373 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 RPS20P4-201ENST00000461659 355 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 RPL7P39-201ENST00000481157 744 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 RPL36AP51-201ENST00000487216 318 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC007182.2-201ENST00000489251 402 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC005741.1-201ENST00000511094 432 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC112206.3-201ENST00000514578 389 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 Y_RNA.691-201ENST00000516611 103 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 TPRX1P1-201ENST00000557620 319 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC026956.1-201ENST00000558741 396 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 MIR4666A-201ENST00000580160 79 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC009977.1-201ENST00000586015 570 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC104785.1-201ENST00000603220 588 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC018695.5-201ENST00000605872 315 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC090617.10-201ENST00000624308 134 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC091905.1-201ENST00000624400 311 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AC015689.2-201ENST00000528172 1738 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL354854.1-201ENST00000455940 1363 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 AL008638.3-201ENST00000623027 5182 ntBASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL25A1Q9BXS0 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
COL25A1Q9BXS0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL25A1Q9BXS0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
COL25A1Q9BXS0 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL25A1Q9BXS0 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.02□□□□□ -1.29
COL25A1Q9BXS0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL25A1Q9BXS0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms