Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC007996.1-201ENST00000620414 2821 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 PANDAR-201ENST00000629595 1506 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC114947.2-201ENST00000565748 2125 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC235565.1-201ENST00000456962 1325 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RNU6-304P-201ENST00000364855 107 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AL512422.1-201ENST00000407033 553 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AL590623.1-201ENST00000427864 105 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 MTCO3P21-201ENST00000430791 643 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC004980.3-201ENST00000447046 365 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SIAH1P1-201ENST00000479411 923 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RPL7P39-201ENST00000481157 744 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 HMGB1P3-201ENST00000502802 616 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 IGKV2-18-201ENST00000522607 343 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC024940.3-201ENST00000538551 316 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC068993.1-201ENST00000546724 589 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AL512310.9-201ENST00000553311 948 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC127381.1-201ENST00000555979 939 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC068714.1-201ENST00000559623 800 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 MIR4310-201ENST00000582950 57 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AL049844.2-201ENST00000604280 628 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 BNIP3P35-201ENST00000604530 490 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC109309.2-201ENST00000612597 332 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RPSAP73-201ENST00000614820 330 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AC006213.5-201ENST00000619673 288 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 TMEM30CP-203ENST00000637814 1035 ntBASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM5Q96HC4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC017079.1-201ENST00000333650 415 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 RN7SKP162-201ENST00000363605 345 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 RN7SKP113-201ENST00000363891 295 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 MIR600-201ENST00000385007 98 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL035079.1-201ENST00000405210 287 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 U3.32-201ENST00000408116 212 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CHEK2P5-201ENST00000423877 246 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CFL1P1-202ENST00000432948 411 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC092013.1-201ENST00000438795 332 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 RPL7AP52-201ENST00000458096 790 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC024558.1-201ENST00000505008 528 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 OR10D4P-201ENST00000525892 951 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 MIR3908-201ENST00000579798 126 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC123786.2-201ENST00000603459 275 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 BX322635.1-201ENST00000605804 496 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL391834.1-201ENST00000609609 560 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms