Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 RANP4-201ENST00000413361 655 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 BX510359.3-201ENST00000422168 306 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 UBE2D3P1-201ENST00000436669 444 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 EEF1B2P6-201ENST00000445713 673 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC073909.1-201ENST00000447112 999 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC105384.2-201ENST00000508433 640 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AF213884.2-201ENST00000510417 903 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 OR5BM1P-201ENST00000512021 366 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 MTCYBP20-201ENST00000524239 1129 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 OR4A2P-201ENST00000527276 913 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 IGBP1P1-201ENST00000554337 1009 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AC051619.2-201ENST00000559063 397 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 MIR4443-201ENST00000585052 53 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AL583832.1-201ENST00000603227 784 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 AL583856.2-201ENST00000606298 543 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX11Q96FC9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.74□□□□□ -1.33
DDX11Q96FC9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
DDX11Q96FC9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 RAD1P1-201ENST00000231383 813 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 OR8V1P-201ENST00000395193 873 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AP002784.2-201ENST00000397300 549 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 RNU4-22P-201ENST00000411058 166 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL357752.1-201ENST00000412817 349 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 TRGV6-201ENST00000417928 299 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 SETP9-201ENST00000423837 832 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL390023.1-201ENST00000428836 262 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC022215.1-201ENST00000481770 362 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 RPS12P31-201ENST00000491419 398 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 DUTP1-201ENST00000493631 470 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC138866.2-201ENST00000508650 584 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC139365.2-201ENST00000517972 253 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC010306.1-201ENST00000523223 1117 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 MTND4P33-201ENST00000556706 766 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 MIR4260-201ENST00000583107 67 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC079880.2-201ENST00000603790 1213 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC121247.2-201ENST00000604776 136 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 RNA5SP439-201ENST00000617595 124 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AP002782.1-201ENST00000623107 614 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX11Q96FC9 AC112255.1-201ENST00000624070 2493 ntBASIC6.73□□□□□ -1.33
DDX11Q96FC9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX11Q96FC9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX11Q96FC9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.72□□□□□ -1.33
DDX11Q96FC9 SAMM50P1-201ENST00000455403 1399 ntBASIC6.72□□□□□ -1.33
DDX11Q96FC9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DDX11Q96FC9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX11Q96FC9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms