Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ATP5F1P7-201ENST00000567330 760 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 MTND4LP24-201ENST00000572277 291 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC064807.4-201ENST00000607201 407 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC013468.1-201ENST00000608680 598 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL445423.1-201ENST00000609941 536 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 MIR193BHG-214ENST00000641765 509 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC093671.1-201ENST00000624981 2929 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC138907.8-201ENST00000623981 2256 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC083899.1-201ENST00000454465 3819 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MSL3P1-202ENST00000440028 1468 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 UGT2B26P-201ENST00000508672 1613 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 METTL21EP-201ENST00000298105 713 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 GAPDHP24-201ENST00000328713 983 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RNU6-666P-201ENST00000363499 107 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RNU6-549P-201ENST00000384433 107 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MT-RNR2-201ENST00000387347 1559 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SNORA17A-201ENST00000391185 133 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RNA5SP498-201ENST00000411342 120 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC096921.1-201ENST00000411661 375 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RPL23AP4-201ENST00000427757 463 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 DUTP7-201ENST00000507982 486 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC010486.3-201ENST00000511602 785 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MTCO3P28-201ENST00000513351 515 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RNU6-1004P-201ENST00000516584 111 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC136777.2-201ENST00000522979 358 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SETP1-201ENST00000556014 845 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL355834.1-201ENST00000556602 3965 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AP002884.5-201ENST00000595053 1132 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC021749.1-201ENST00000604322 607 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL139344.1-201ENST00000605228 195 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC016877.3-201ENST00000606778 504 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC109454.4-201ENST00000623411 649 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SNORA17.5-201ENST00000630429 132 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AC119674.1-212ENST00000641155 993 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MTND4P10-201ENST00000446199 1363 ntBASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTHRC1Q96CG8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 PWAR1-201ENST00000624188 2414 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms