Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 ZNF733P-202ENST00000444809 1573 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RN7SKP162-201ENST00000363605 345 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RNU6-171P-201ENST00000384354 107 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RNU6-584P-201ENST00000410350 95 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 GNG5P5-201ENST00000420444 220 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 FO393414.1-201ENST00000428697 1184 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC114973.1-201ENST00000429057 632 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RPL7P56-201ENST00000429441 717 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC073465.2-201ENST00000440938 498 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AL450996.1-201ENST00000445574 1202 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RPS26P41-201ENST00000450370 284 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AP005403.1-201ENST00000579720 229 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 MIR1269B-201ENST00000580405 75 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AP000919.1-202ENST00000581139 1264 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 OR7A19P-201ENST00000608051 733 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AL512427.1-201ENST00000618593 349 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 AC132068.1-201ENST00000623805 459 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 MUC2-202ENST00000613187 4845 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.57□□□□□ -1.36
CHMP4CQ96CF2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 GAPDHP24-201ENST00000328713 983 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 RNA5SP234-201ENST00000363916 119 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 RNA5SP132-201ENST00000364725 118 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 RNU4-31P-201ENST00000384211 141 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 MIR551A-201ENST00000385042 96 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 GAPDHP42-201ENST00000406848 981 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC096533.1-201ENST00000411645 353 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 Z68694.1-201ENST00000413929 841 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 NPM1P4-201ENST00000414095 812 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 UBE2V1P9-201ENST00000414760 368 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL133482.1-201ENST00000415988 498 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC113412.1-201ENST00000425840 504 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 DEFB130D-201ENST00000426866 237 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 FABP5P3-201ENST00000437960 408 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL450023.1-201ENST00000450868 751 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 CBX1P2-201ENST00000453841 458 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 HSPE1P22-201ENST00000456856 327 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 PSMC1P13-201ENST00000458195 985 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 snoU109.3-201ENST00000459477 145 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 RPS20P4-201ENST00000461659 355 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL133445.1-201ENST00000467051 452 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC104982.1-201ENST00000478775 574 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC091544.1-201ENST00000484702 348 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC008427.1-201ENST00000503102 655 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC010460.2-201ENST00000509054 677 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 OR8X1P-201ENST00000534542 869 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 AL121594.4-201ENST00000556211 1196 ntBASIC6.56□□□□□ -1.36
CHMP4CQ96CF2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms