Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC006453.5-201ENST00000636451 619 ntBASIC5.35□□□□□ -1.55
SEMA4DQ92854 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.35□□□□□ -1.55
SEMA4DQ92854 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SEMA4DQ92854 AC007996.1-201ENST00000620414 2821 ntBASIC5.35□□□□□ -1.55
SEMA4DQ92854 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.35□□□□□ -1.55
SEMA4DQ92854 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SEMA4DQ92854 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEMA4DQ92854 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEMA4DQ92854 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.35□□□□□ -1.55
SEMA4DQ92854 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 OR10AB1P-202ENST00000641219 1686 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 CASC19-281ENST00000642118 1554 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 Y_RNA.110-201ENST00000363220 99 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AL078599.1-201ENST00000402075 293 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AL357515.1-201ENST00000402967 542 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 UBE2V1P15-201ENST00000407776 448 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 RPL23AP27-201ENST00000415161 451 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC093162.1-201ENST00000419682 124 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 EIF2S2P3-201ENST00000428356 999 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC022336.1-201ENST00000475510 337 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC074029.2-201ENST00000551045 634 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC087763.1-201ENST00000603391 286 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 Z95327.3-201ENST00000610385 572 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC018445.2-201ENST00000622987 260 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 AP002371.2-201ENST00000624450 503 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.55
SEMA4DQ92854 AC104623.2-202ENST00000623477 4002 ntBASIC5.34□□□□□ -1.55
SEMA4DQ92854 NAMPTP1-201ENST00000440465 2514 ntBASIC5.34□□□□□ -1.56
SEMA4DQ92854 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.34□□□□□ -1.56
SEMA4DQ92854 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SEMA4DQ92854 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SEMA4DQ92854 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.56
SEMA4DQ92854 AC011503.2-201ENST00000594230 1500 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 MTHFD2P5-201ENST00000320415 844 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 RNU4-39P-201ENST00000362455 127 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 RN7SKP104-201ENST00000362605 328 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 SNORA73.1-201ENST00000363107 205 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 NPM1P37-201ENST00000403105 874 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC007738.1-201ENST00000413892 348 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 RPL7P11-201ENST00000437586 658 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 AL137845.2-201ENST00000444292 988 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 SETP12-201ENST00000514068 805 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 LINC00557-201ENST00000563184 1279 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.33□□□□□ -1.56
SEMA4DQ92854 AC011453.2-201ENST00000603737 729 ntBASIC5.33□□□□□ -1.56
SEMA4DQ92854 OR51C1P-201ENST00000608504 942 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms