Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC019050.1-201ENST00000418508 492 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC092648.1-201ENST00000425870 423 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL445528.1-201ENST00000426330 420 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 UBE2D3P3-201ENST00000426992 425 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 BX323845.1-201ENST00000432417 179 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL645931.1-201ENST00000439737 410 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL009048.1-201ENST00000450437 298 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC117522.2-201ENST00000510049 657 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC112673.1-201ENST00000513168 575 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 OR4A6P-201ENST00000534364 970 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 OR5AN2P-201ENST00000534535 896 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 GCSHP4-201ENST00000538792 439 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC084824.2-201ENST00000548906 345 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC079148.1-201ENST00000565944 819 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AP001160.4-201ENST00000596971 382 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 MEMO1P5-201ENST00000604810 406 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE4Q8N205 AL356752.1-201ENST00000615844 593 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AP000943.4-201ENST00000622912 357 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AC004943.3-201ENST00000624116 600 ntBASIC6.48□□□□□ -1.37
SYNE4Q8N205 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE4Q8N205 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE4Q8N205 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE4Q8N205 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE4Q8N205 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 LUZP4P1-201ENST00000415420 344 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 MTCYBP7-201ENST00000419540 1134 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AJ239321.1-201ENST00000424255 564 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AL161722.1-201ENST00000446972 1032 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 NDUFA12P1-201ENST00000455914 406 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 DUXAP8-207ENST00000456786 622 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 snoU13.29-201ENST00000459370 104 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 MIR4270-201ENST00000581799 70 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 FAM60CP-201ENST00000591086 664 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC105254.2-201ENST00000603636 436 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AL022161.1-201ENST00000604390 213 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC011626.1-201ENST00000604710 562 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AL139124.1-201ENST00000609123 421 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 DUXAP10-204ENST00000612052 616 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AL355493.4-201ENST00000618530 292 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 MIR6758-201ENST00000620653 63 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC012414.7-202ENST00000622705 1090 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC139792.2-201ENST00000624218 587 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC126544.2-201ENST00000625174 749 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC135068.12-201ENST00000637370 931 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC073365.1-203ENST00000641055 1992 ntBASIC6.47□□□□□ -1.37
SYNE4Q8N205 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE4Q8N205 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE4Q8N205 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
SYNE4Q8N205 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE4Q8N205 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SYNE4Q8N205 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE4Q8N205 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE4Q8N205 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms