Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 OR13Z1P-201ENST00000416141 834 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RGS17P1-201ENST00000423358 553 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 EIF4HP2-201ENST00000424380 563 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC005033.1-201ENST00000428904 813 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RHOT1P3-201ENST00000436571 331 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC000111.2-201ENST00000448200 210 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RN7SL319P-201ENST00000480656 221 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC098583.1-201ENST00000480875 255 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC090142.2-201ENST00000483263 416 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 MIR4675-201ENST00000577898 77 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 MIR4489-201ENST00000578869 62 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 MIR1269B-201ENST00000580405 75 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AL356752.1-201ENST00000615844 593 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 BNIP3P41-202ENST00000616656 861 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AC010809.3-201ENST00000621310 641 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.61
CDKL3Q8IVW4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AL590763.1-201ENST00000398297 1545 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC008549.2-201ENST00000333482 706 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 U3.35-201ENST00000408405 208 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 TBCAP2-201ENST00000416175 326 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 BMS1P13-201ENST00000417301 885 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 NMNAT1P2-201ENST00000435192 860 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AP000942.1-201ENST00000463969 747 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AL591473.1-201ENST00000464297 313 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 RN7SL214P-201ENST00000487317 265 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC004980.4-201ENST00000513375 203 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC138938.1-201ENST00000515431 782 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC105036.1-201ENST00000566222 271 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC007448.1-201ENST00000582714 234 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC006116.3-201ENST00000592968 361 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 MEMO1P5-201ENST00000604810 406 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 AC093799.2-201ENST00000610062 578 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 CASC19-281ENST00000642118 1554 ntBASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDKL3Q8IVW4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 RNU6-729P-201ENST00000384399 107 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 RNU6-709P-201ENST00000517257 104 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC007066.2-202ENST00000566531 914 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms