Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC138907.8-201ENST00000623981 2256 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AL049737.1-201ENST00000413920 1403 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VRK3Q8IV63 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VRK3Q8IV63 ZNF90P1-201ENST00000480493 1951 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VRK3Q8IV63 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 MIR375-201ENST00000362103 64 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RN7SKP279-201ENST00000411383 298 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 NENFP1-201ENST00000419476 466 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 MTCYBP5-201ENST00000423752 1135 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RPF2P1-201ENST00000424137 906 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 SUMO2P3-201ENST00000438311 288 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC144530.1-201ENST00000452862 555 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC008280.2-201ENST00000455473 307 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC104689.1-201ENST00000473356 768 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 SNRPCP3-201ENST00000474888 476 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC022215.1-201ENST00000481770 362 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RN7SL570P-201ENST00000484405 292 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RPS7P6-201ENST00000485777 579 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 MTND5P13-201ENST00000513046 1079 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 RNU6-943P-201ENST00000516960 98 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC007115.1-201ENST00000546853 234 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC093524.1-201ENST00000564266 1094 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 ZNF415P1-201ENST00000582279 1166 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AP001596.2-201ENST00000608410 312 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC103591.3-201ENST00000608684 209 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC116165.2-201ENST00000616705 206 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 AC019226.1-201ENST00000625666 515 ntBASIC5.59□□□□□ -1.51
VRK3Q8IV63 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.59□□□□□ -1.51
VRK3Q8IV63 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VRK3Q8IV63 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.59□□□□□ -1.52
VRK3Q8IV63 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
VRK3Q8IV63 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VRK3Q8IV63 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
VRK3Q8IV63 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
VRK3Q8IV63 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
VRK3Q8IV63 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VRK3Q8IV63 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
VRK3Q8IV63 AC092070.2-203ENST00000598377 3644 ntBASIC5.59□□□□□ -1.52
VRK3Q8IV63 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC023490.2-201ENST00000359859 470 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RNU5B-1-201ENST00000363286 116 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RN7SKP292-201ENST00000365522 317 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 SNORD116-12-201ENST00000384468 92 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RAP1BP3-201ENST00000407180 549 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC004022.2-201ENST00000413824 193 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 CDY17P-201ENST00000414121 1282 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 PTP4A1P5-201ENST00000420305 455 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC021876.1-201ENST00000425959 359 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC092393.1-201ENST00000439625 742 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL360221.1-201ENST00000445989 335 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC104978.1-201ENST00000449387 391 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 Z95152.1-201ENST00000453556 656 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms