Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RNU6-1214P-201ENST00000363650 109 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RNU4-92P-201ENST00000363783 136 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 VDAC2P1-201ENST00000399358 958 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 MTCO1P56-201ENST00000401674 224 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 HMGB3P18-201ENST00000406327 590 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RPL35AP3-201ENST00000414680 288 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL133482.1-201ENST00000415988 498 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL356320.2-201ENST00000417263 507 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RPS4XP5-201ENST00000419038 768 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 FAM183DP-201ENST00000421987 399 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 C1DP1-201ENST00000426049 402 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 HIGD1AP12-201ENST00000427832 281 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL353662.1-201ENST00000439099 327 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL359265.1-201ENST00000440296 795 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL050341.1-201ENST00000447743 313 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL445466.1-201ENST00000448432 357 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 KF459542.1-201ENST00000450908 553 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 OTX2P1-201ENST00000450956 354 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 OR2AF1P-201ENST00000454899 889 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL133244.1-201ENST00000456007 258 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 USP9YP25-201ENST00000457708 443 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RN7SL188P-201ENST00000469842 285 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RN7SL362P-201ENST00000494228 267 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC010486.3-201ENST00000511602 785 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 SNORA3.4-201ENST00000515969 96 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 Y_RNA.688-201ENST00000516565 95 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC068305.2-201ENST00000550567 1205 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC009237.15-201ENST00000610252 501 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AL021918.2-201ENST00000613415 194 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 FRG1HP-204ENST00000617940 757 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC068137.4-201ENST00000638485 296 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 SAMMSON-209ENST00000641222 1100 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC104964.3-201ENST00000606115 2860 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 CASC19-248ENST00000641674 1356 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC008627.1-201ENST00000517511 1704 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 RNU4-31P-201ENST00000384211 141 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 RPL23AP59-201ENST00000399415 461 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC079809.1-201ENST00000415468 276 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AL008987.1-201ENST00000415528 237 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 MTND2P18-201ENST00000419962 1030 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 DNAJA1P5-201ENST00000440278 943 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 CASP3P1-201ENST00000446037 609 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AL035407.2-201ENST00000454090 378 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 RN7SL269P-201ENST00000467795 305 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC113367.2-201ENST00000505749 160 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC112484.3-201ENST00000505910 329 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC034244.1-201ENST00000507687 207 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC105384.2-201ENST00000508433 640 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC138866.2-201ENST00000508650 584 ntBASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD4Q6ZW05 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms