Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC009238.2-201ENST00000431026 355 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 MTCO1P57-201ENST00000432182 261 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 CASP3P1-201ENST00000446037 609 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 BTF3P6-201ENST00000448054 499 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 OR2AF1P-201ENST00000454899 889 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 Z92846.1-201ENST00000456203 268 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 RPL7P6-201ENST00000480903 738 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC005412.2-201ENST00000492004 341 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC024558.1-201ENST00000505008 528 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 MTCYBP19-201ENST00000517463 1124 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 NPM1P35-201ENST00000533043 868 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 MIR3176-201ENST00000582210 90 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC068020.1-201ENST00000594215 661 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC130352.1-201ENST00000602979 661 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AL512329.2-201ENST00000607350 548 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 AC145207.9-201ENST00000623802 325 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SPATA2P1-201ENST00000431223 2055 ntBASIC4.66□□□□□ -1.66
NIPAL3Q6P499 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.66□□□□□ -1.66
NIPAL3Q6P499 CASC19-284ENST00000642142 1868 ntBASIC4.65□□□□□ -1.66
NIPAL3Q6P499 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NIPAL3Q6P499 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 RNU1-43P-201ENST00000365052 165 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 EI24P3-201ENST00000399046 1062 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AMZ2P2-201ENST00000406819 1057 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 RN7SKP229-201ENST00000410465 302 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 RPS29P10-201ENST00000439197 166 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC243772.1-201ENST00000451620 410 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 RPS21P4-201ENST00000487122 248 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC097173.1-201ENST00000505862 819 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 GTF2F2P1-201ENST00000511083 675 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC034244.2-201ENST00000514668 858 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 RNU6-491P-201ENST00000516099 110 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 BNIP3P1-201ENST00000547295 580 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC127381.1-201ENST00000555979 939 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AL137072.1-201ENST00000603444 466 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 BNIP3P35-201ENST00000604530 490 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC096553.1-201ENST00000605169 829 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC073111.2-201ENST00000605657 1075 ntBASIC4.65□□□□□ -1.67
NIPAL3Q6P499 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NIPAL3Q6P499 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NIPAL3Q6P499 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms