Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL731566.1-201ENST00000620490 1937 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 AL583835.1-201ENST00000399570 407 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 MTCO1P35-201ENST00000515270 228 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 AC005868.1-201ENST00000536421 331 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 AC073137.1-201ENST00000605636 634 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 SNX18P1Y-201ENST00000616231 511 ntBASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CDC42BPAQ5VT25 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RN7SKP227-201ENST00000364445 330 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RNA5SP317-201ENST00000410176 116 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RN7SKP27-201ENST00000410684 333 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RNA5SP311-201ENST00000411290 116 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 NFYAP1-201ENST00000431953 972 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC021660.1-201ENST00000465006 554 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC041039.1-201ENST00000485656 536 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC108475.1-201ENST00000507880 950 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RNA5SP315-201ENST00000516340 116 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RNA5SP312-201ENST00000517068 116 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AL445567.2-201ENST00000618935 498 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 AC093297.3-201ENST00000607056 2517 ntBASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDC42BPAQ5VT25 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AL022722.2-201ENST00000402519 180 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC114755.5-201ENST00000447760 831 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC090142.1-201ENST00000465776 462 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC073073.1-201ENST00000493920 463 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC023424.1-201ENST00000496058 459 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC015912.2-201ENST00000571053 181 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 MIR492-201ENST00000638676 116 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 PTER-201ENST00000298942 3448 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC011933.1-201ENST00000413334 321 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC079809.1-201ENST00000415468 276 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 CKS1BP6-201ENST00000424932 240 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 RPS29P17-201ENST00000430795 166 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC122718.1-201ENST00000439448 744 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AL359073.1-201ENST00000448036 403 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC116533.1-201ENST00000459748 321 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 FAM133DP-201ENST00000464802 691 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 RPL23AP53-201ENST00000521854 457 ntBASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDC42BPAQ5VT25 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 ADAM24P-201ENST00000398655 2101 ntBASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 AL590762.2-201ENST00000395798 571 ntBASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 MYL12BP2-201ENST00000503948 512 ntBASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDC42BPAQ5VT25 OR51H2P-202ENST00000641424 3046 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms