Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HMGB3P9-201ENST00000441799 583 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 VDAC2P4-201ENST00000452925 711 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 HLA-DPA3-207ENST00000454398 229 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 RPL23AP64-201ENST00000469465 435 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC117395.1-201ENST00000487390 403 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC026427.2-201ENST00000506228 536 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC004825.1-201ENST00000555068 586 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AL592295.2-201ENST00000612578 206 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AF001550.2-201ENST00000636643 217 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 OR52B5P-202ENST00000641118 1110 ntBASIC8.21□□□□□ -1.1
RC3H1Q5TC82 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RC3H1Q5TC82 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 RPL12P12-201ENST00000424633 501 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ATP5LP2-201ENST00000440646 311 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AC007998.1-201ENST00000474156 672 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 RN7SL369P-201ENST00000477138 299 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SRP72-202ENST00000504757 745 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SNORD46.2-201ENST00000516021 102 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 RNA5SP340-201ENST00000517132 107 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AP000662.1-201ENST00000530952 487 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AK6P1-201ENST00000540219 478 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 CR383656.6-201ENST00000550518 394 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 MIR6768-201ENST00000610734 72 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AC131009.3-201ENST00000621809 287 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AL359880.1-201ENST00000621879 266 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AC023245.2-201ENST00000530760 2978 ntBASIC8.2□□□□□ -1.1
RC3H1Q5TC82 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RC3H1Q5TC82 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL034417.4-202ENST00000642135 2236 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AL136984.1-201ENST00000607611 1893 ntBASIC8.19□□□□□ -1.1
RC3H1Q5TC82 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.19□□□□□ -1.1
RC3H1Q5TC82 AC008555.1-201ENST00000561778 2757 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms