Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC025031.4-201ENST00000621248 3271 ntBASIC7.79□□□□□ -1.16
SNAPC4Q5SXM2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNAPC4Q5SXM2 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SNAPC4Q5SXM2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 RNA5SP241-201ENST00000391326 114 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 RPL23AP26-201ENST00000412728 464 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 ZFRP1-201ENST00000457579 2970 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 UQCRHP4-201ENST00000471686 272 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AC041039.1-201ENST00000485656 536 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 AC092709.1-201ENST00000521355 1045 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 RN7SL652P-201ENST00000577769 300 ntBASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNAPC4Q5SXM2 SOCS5P3-201ENST00000425115 1576 ntBASIC7.77□□□□□ -1.16
SNAPC4Q5SXM2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.77□□□□□ -1.16
SNAPC4Q5SXM2 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.77□□□□□ -1.16
SNAPC4Q5SXM2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 AMZ2P2-201ENST00000406819 1057 ntBASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 AC021193.1-201ENST00000511607 420 ntBASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 AP005901.4-201ENST00000577336 569 ntBASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 AC090220.1-201ENST00000593078 1699 ntBASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNAPC4Q5SXM2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 TMSB10P2-201ENST00000416049 131 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 OR13Z1P-201ENST00000416141 834 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 RPS17P8-201ENST00000434525 335 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC073052.1-201ENST00000440417 714 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AP003730.1-201ENST00000524605 285 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC040958.1-201ENST00000561102 201 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC116553.2-201ENST00000564203 463 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC021422.1-201ENST00000621212 473 ntBASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.76□□□□□ -1.17
SNAPC4Q5SXM2 SPRR2C-201ENST00000290702 219 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 AC021146.4-201ENST00000309229 279 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 RNA5SP387-201ENST00000364226 106 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 RPL12P9-201ENST00000412942 488 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 RN7SL810P-201ENST00000493031 276 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 NIFKP7-201ENST00000503365 834 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 RNU1-45P-201ENST00000517191 141 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 AC010476.1-201ENST00000519111 851 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 OR8R1P-201ENST00000543943 764 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 RN7SL176P-201ENST00000580352 264 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 AL352984.2-202ENST00000613699 155 ntBASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SNAPC4Q5SXM2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms