Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 OR5M14P-201ENST00000506803 618 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 MRPS33P2-201ENST00000507850 322 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC004980.4-201ENST00000513375 203 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC008126.1-201ENST00000549019 480 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 HMGN2P6-201ENST00000551091 273 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 TVP23CP2-201ENST00000571473 623 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 MIR6719-201ENST00000622428 87 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 AC012414.7-202ENST00000622705 1090 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS1Q01581 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 CASC19-281ENST00000642118 1554 ntBASIC4.69□□□□□ -1.66
HMGCS1Q01581 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS1Q01581 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC123912.3-201ENST00000600907 1367 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC126323.6-202ENST00000568092 3511 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 GJA6P-201ENST00000415117 1042 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 E2F6P2-201ENST00000420708 748 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 BTG3P1-201ENST00000435859 716 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 TPT1P1-201ENST00000458495 518 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC020890.1-201ENST00000491837 504 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 RN7SKP66-201ENST00000516681 231 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 OR10D4P-201ENST00000525892 951 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AL049839.1-201ENST00000556151 657 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC243960.7-201ENST00000623532 707 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 AP003072.5-201ENST00000623872 773 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 SOCS5P3-201ENST00000425115 1576 ntBASIC4.68□□□□□ -1.66
HMGCS1Q01581 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS1Q01581 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS1Q01581 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL034370.1-201ENST00000397254 1590 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 RNA5SP305-201ENST00000362665 119 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL021331.1-201ENST00000402817 582 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL592291.1-201ENST00000403830 352 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 RPL34P6-201ENST00000432390 345 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGCS1Q01581 RN7SL515P-201ENST00000463999 297 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AL591473.1-201ENST00000464297 313 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 RPL5P22-201ENST00000480199 884 ntBASIC4.67□□□□□ -1.66
HMGCS1Q01581 AC116562.1-201ENST00000485355 781 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms