Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 SNRPFP2-201ENST00000440710 251 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 RN7SL329P-201ENST00000467740 299 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 ENPP7P9-201ENST00000514456 627 ntBASIC4.66□□□□□ -1.66
LIM2P55344 RNA5SP303-201ENST00000516192 130 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC027308.1-201ENST00000517993 110 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.66□□□□□ -1.66
LIM2P55344 OR5AZ1P-201ENST00000527448 943 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.66□□□□□ -1.66
LIM2P55344 MIR3936-201ENST00000584304 110 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC010487.1-201ENST00000594408 1172 ntBASIC4.66□□□□□ -1.66
LIM2P55344 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 OR51C1P-201ENST00000608504 942 ntBASIC4.66□□□□□ -1.66
LIM2P55344 OR7M1P-201ENST00000608946 533 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC073575.2-201ENST00000614212 627 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AL590410.1-201ENST00000617925 333 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AL353662.3-201ENST00000625131 237 ntBASIC4.66□□□□□ -1.66
LIM2P55344 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LIM2P55344 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.66□□□□□ -1.66
LIM2P55344 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.65□□□□□ -1.66
LIM2P55344 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
LIM2P55344 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LIM2P55344 HSPA8P14-201ENST00000552265 1805 ntBASIC4.65□□□□□ -1.66
LIM2P55344 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LIM2P55344 AC008079.2-201ENST00000623543 20396 ntBASIC4.65□□□□□ -1.66
LIM2P55344 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
LIM2P55344 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
LIM2P55344 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LIM2P55344 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.65□□□□□ -1.67
LIM2P55344 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.65□□□□□ -1.67
LIM2P55344 PRPF38AP2-201ENST00000438179 851 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.65□□□□□ -1.67
LIM2P55344 TPT1P1-201ENST00000458495 518 ntBASIC4.65□□□□□ -1.67
LIM2P55344 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.65□□□□□ -1.67
LIM2P55344 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.65□□□□□ -1.67
LIM2P55344 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 AC008033.2-201ENST00000542626 177 ntBASIC4.65□□□□□ -1.67
LIM2P55344 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.65□□□□□ -1.67
LIM2P55344 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.65□□□□□ -1.67
LIM2P55344 RN7SL435P-201ENST00000584418 282 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AC011487.3-201ENST00000593607 453 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AC020915.5-201ENST00000596836 964 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 AC087783.2-201ENST00000605070 562 ntBASIC4.65□□□□□ -1.67
LIM2P55344 BNIP3P7-201ENST00000605641 516 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AC133644.2-201ENST00000608142 540 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AP001521.2-201ENST00000608772 546 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AC090510.2-201ENST00000617465 629 ntBASIC4.65□□□□□ -1.67
LIM2P55344 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.65□□□□□ -1.67
LIM2P55344 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 AC099654.2-201ENST00000433031 1980 ntBASIC4.65□□□□□ -1.67
LIM2P55344 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.65□□□□□ -1.67
LIM2P55344 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LIM2P55344 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIM2P55344 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
LIM2P55344 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.64□□□□□ -1.67
LIM2P55344 AL731566.1-201ENST00000620490 1937 ntBASIC4.64□□□□□ -1.67
LIM2P55344 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LIM2P55344 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 RNU6-891P-201ENST00000384280 111 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AL109941.1-201ENST00000401925 229 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AL357515.1-201ENST00000402967 542 ntBASIC4.64□□□□□ -1.67
LIM2P55344 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.64□□□□□ -1.67
LIM2P55344 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 GTF2IP5-201ENST00000414608 731 ntBASIC4.64□□□□□ -1.67
LIM2P55344 TBCAP2-201ENST00000416175 326 ntBASIC4.64□□□□□ -1.67
LIM2P55344 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.64□□□□□ -1.67
LIM2P55344 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIM2P55344 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.64□□□□□ -1.67
LIM2P55344 AC093414.1-201ENST00000434712 514 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms