Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
PDX1P52945 OR13C3-201ENST00000374781 1108 ntBASIC5.05□□□□□ -1.6
PDX1P52945 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 FAR2P2-201ENST00000413041 594 ntBASIC5.05□□□□□ -1.6
PDX1P52945 GLUD1P9-201ENST00000420997 1173 ntBASIC5.05□□□□□ -1.6
PDX1P52945 FAR2P4-202ENST00000425399 584 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AC073508.1-201ENST00000428866 656 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.05□□□□□ -1.6
PDX1P52945 SNRPFP2-201ENST00000440710 251 ntBASIC5.05□□□□□ -1.6
PDX1P52945 VN1R48P-201ENST00000448149 1036 ntBASIC5.05□□□□□ -1.6
PDX1P52945 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.05□□□□□ -1.6
PDX1P52945 RPS29P33-201ENST00000456717 146 ntBASIC5.05□□□□□ -1.6
PDX1P52945 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.05□□□□□ -1.6
PDX1P52945 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 IGBP1P4-201ENST00000503202 879 ntBASIC5.05□□□□□ -1.6
PDX1P52945 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.05□□□□□ -1.6
PDX1P52945 HMGN1P9-201ENST00000515212 298 ntBASIC5.05□□□□□ -1.6
PDX1P52945 OR4A43P-201ENST00000532938 908 ntBASIC5.05□□□□□ -1.6
PDX1P52945 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 MIR4691-201ENST00000583764 85 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 AL671309.1-201ENST00000603750 544 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AC005084.1-201ENST00000605160 304 ntBASIC5.05□□□□□ -1.6
PDX1P52945 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 AC006213.4-201ENST00000616184 634 ntBASIC5.05□□□□□ -1.6
PDX1P52945 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
PDX1P52945 AC091905.4-201ENST00000623432 202 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AP002371.2-201ENST00000624450 503 ntBASIC5.05□□□□□ -1.6
PDX1P52945 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDX1P52945 AC011503.2-201ENST00000594230 1500 ntBASIC5.05□□□□□ -1.6
PDX1P52945 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDX1P52945 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PDX1P52945 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDX1P52945 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 AC074367.1-201ENST00000438685 1125 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDX1P52945 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 GYG1P1-201ENST00000460864 698 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AC104629.2-201ENST00000468627 598 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AP000797.2-201ENST00000475768 606 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 OR51K1P-201ENST00000510214 950 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AC021193.1-201ENST00000511607 420 ntBASIC5.04□□□□□ -1.6
PDX1P52945 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.04□□□□□ -1.6
PDX1P52945 GSTP1P1-201ENST00000548078 319 ntBASIC5.04□□□□□ -1.6
PDX1P52945 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.04□□□□□ -1.6
PDX1P52945 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.04□□□□□ -1.6
PDX1P52945 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 AC002069.2-201ENST00000603580 883 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AL450270.1-201ENST00000606160 391 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.04□□□□□ -1.6
PDX1P52945 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 AC253576.2-201ENST00000618815 580 ntBASIC5.04□□□□□ -1.6
PDX1P52945 AC019080.5-201ENST00000624891 757 ntBASIC5.04□□□□□ -1.6
PDX1P52945 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDX1P52945 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms