Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HCFC1P51610 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC1P51610 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC1P51610 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HCFC1P51610 Y_RNA.110-201ENST00000363220 99 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC1P51610 SNORA66-201ENST00000384792 133 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 AL049697.2-201ENST00000403708 294 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 COX6CP17-201ENST00000421389 185 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 HSFY1P1-201ENST00000423928 1178 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC1P51610 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC1P51610 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC1P51610 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC1P51610 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC1P51610 SNORA70.11-201ENST00000515987 138 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 SNORA70.13-201ENST00000516116 138 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 C1GALT1P3-201ENST00000522049 819 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC1P51610 OR4A17P-201ENST00000526032 904 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC1P51610 AC068993.1-201ENST00000546724 589 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 AC074050.1-201ENST00000563247 211 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.43□□□□□ -1.7
HCFC1P51610 MIR3667-201ENST00000581025 74 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 AL512782.1-201ENST00000603093 364 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.43□□□□□ -1.7
HCFC1P51610 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC1P51610 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC1P51610 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCFC1P51610 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 MAPK10-328ENST00000641553 4009 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HCFC1P51610 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.42□□□□□ -1.7
HCFC1P51610 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.42□□□□□ -1.7
HCFC1P51610 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCFC1P51610 SNORA70.6-201ENST00000383934 134 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 MIR7-1-201ENST00000384871 110 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 RNA5SP332-201ENST00000391063 115 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AL139039.2-201ENST00000407436 479 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.42□□□□□ -1.7
HCFC1P51610 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.42□□□□□ -1.7
HCFC1P51610 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.42□□□□□ -1.7
HCFC1P51610 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.42□□□□□ -1.7
HCFC1P51610 RPL7AP49-201ENST00000429522 581 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AL591438.1-201ENST00000433508 581 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AL392003.1-201ENST00000434394 243 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AC013410.1-201ENST00000436223 1232 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 OR52J1P-201ENST00000450596 932 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AC010733.1-201ENST00000451515 401 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.42□□□□□ -1.7
HCFC1P51610 PRELID3BP5-201ENST00000508612 460 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 HMGN1P9-201ENST00000515212 298 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 RNA5SP392-201ENST00000516905 112 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 RN7SKP260-201ENST00000516907 149 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AP001880.2-201ENST00000538233 448 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 AC020910.2-201ENST00000603635 610 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 AC105254.2-201ENST00000603636 436 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 LSM1P2-201ENST00000604911 322 ntBASIC4.42□□□□□ -1.7
HCFC1P51610 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCFC1P51610 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCFC1P51610 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.42□□□□□ -1.7
HCFC1P51610 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCFC1P51610 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.42□□□□□ -1.7
HCFC1P51610 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 FAM3C2-201ENST00000312214 681 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 CNOT7P1-201ENST00000429006 852 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 BX323845.1-201ENST00000432417 179 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 HSFY7P-201ENST00000432672 318 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 RPL12P18-201ENST00000437175 325 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 MTND4P15-201ENST00000437913 1033 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 HSFY8P-201ENST00000437934 318 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HCFC1P51610 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 HSFY5P-201ENST00000453726 309 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC010350.1-201ENST00000504908 231 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms