Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRCA2P51587 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.02□□□□□ -1.61
BRCA2P51587 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
BRCA2P51587 AC245060.6-201ENST00000624350 8420 ntBASIC5.02□□□□□ -1.61
BRCA2P51587 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 ARAFP2-201ENST00000440565 559 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.01□□□□□ -1.61
BRCA2P51587 AL356121.2-201ENST00000624715 780 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.01□□□□□ -1.61
BRCA2P51587 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
BRCA2P51587 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
BRCA2P51587 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.01□□□□□ -1.61
BRCA2P51587 OR1F12-201ENST00000402365 945 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 RN7SKP159-201ENST00000410657 292 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 SYF2P2-201ENST00000417620 583 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 MIR3653-201ENST00000625572 110 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.01□□□□□ -1.61
BRCA2P51587 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
BRCA2P51587 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 AL035246.1-201ENST00000433554 1255 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 CYCSP32-201ENST00000440548 321 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.01□□□□□ -1.61
BRCA2P51587 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRCA2P51587 FAM27D1-201ENST00000612308 341 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRCA2P51587 OR6C71P-202ENST00000641886 1107 ntBASIC5.01□□□□□ -1.61
BRCA2P51587 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.01□□□□□ -1.61
BRCA2P51587 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 HMGN2P31-201ENST00000432430 273 ntBASIC5□□□□□ -1.61
BRCA2P51587 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 AL451086.1-201ENST00000605596 223 ntBASIC5□□□□□ -1.61
BRCA2P51587 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 ZNF285B-201ENST00000561698 1767 ntBASIC5□□□□□ -1.61
BRCA2P51587 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5□□□□□ -1.61
BRCA2P51587 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC5□□□□□ -1.61
BRCA2P51587 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 ABCF2P2-201ENST00000450549 296 ntBASIC5□□□□□ -1.61
BRCA2P51587 AC022133.1-201ENST00000490961 571 ntBASIC5□□□□□ -1.61
BRCA2P51587 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5□□□□□ -1.61
BRCA2P51587 AP005205.1-201ENST00000563503 508 ntBASIC5□□□□□ -1.61
BRCA2P51587 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 AC019176.2-201ENST00000611579 315 ntBASIC5□□□□□ -1.61
BRCA2P51587 AC009120.7-201ENST00000623452 780 ntBASIC5□□□□□ -1.61
BRCA2P51587 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5□□□□□ -1.61
BRCA2P51587 ZNF833P-201ENST00000424938 1494 ntBASIC5□□□□□ -1.61
BRCA2P51587 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRCA2P51587 SNORA73.2-201ENST00000364946 201 ntBASIC5□□□□□ -1.61
BRCA2P51587 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5□□□□□ -1.61
BRCA2P51587 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 RNA5SP49-201ENST00000516450 115 ntBASIC5□□□□□ -1.61
BRCA2P51587 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
BRCA2P51587 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5□□□□□ -1.61
BRCA2P51587 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
BRCA2P51587 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5□□□□□ -1.61
BRCA2P51587 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms