Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSR1P43307 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
SSR1P43307 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSR1P43307 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.42□□□□□ -1.54
SSR1P43307 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSR1P43307 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.42□□□□□ -1.54
SSR1P43307 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSR1P43307 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSR1P43307 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSR1P43307 AL603766.1-201ENST00000407763 664 ntBASIC5.42□□□□□ -1.54
SSR1P43307 SNORA81-201ENST00000408493 178 ntBASIC5.42□□□□□ -1.54
SSR1P43307 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.42□□□□□ -1.54
SSR1P43307 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.42□□□□□ -1.54
SSR1P43307 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.42□□□□□ -1.54
SSR1P43307 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.42□□□□□ -1.54
SSR1P43307 CYCSP24-201ENST00000445119 316 ntBASIC5.42□□□□□ -1.54
SSR1P43307 RPS26P41-201ENST00000450370 284 ntBASIC5.42□□□□□ -1.54
SSR1P43307 NDUFS5P3-201ENST00000450668 321 ntBASIC5.42□□□□□ -1.54
SSR1P43307 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.42□□□□□ -1.54
SSR1P43307 AC144530.1-201ENST00000452862 555 ntBASIC5.42□□□□□ -1.54
SSR1P43307 AL136038.1-201ENST00000497246 351 ntBASIC5.42□□□□□ -1.54
SSR1P43307 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.42□□□□□ -1.54
SSR1P43307 GTF2F2P1-201ENST00000511083 675 ntBASIC5.42□□□□□ -1.54
SSR1P43307 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.42□□□□□ -1.54
SSR1P43307 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.42□□□□□ -1.54
SSR1P43307 AP001804.2-201ENST00000533932 910 ntBASIC5.42□□□□□ -1.54
SSR1P43307 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SSR1P43307 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.42□□□□□ -1.54
SSR1P43307 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.42□□□□□ -1.54
SSR1P43307 AC090515.3-201ENST00000560431 315 ntBASIC5.42□□□□□ -1.54
SSR1P43307 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.42□□□□□ -1.54
SSR1P43307 SNORD39.2-201ENST00000579995 76 ntBASIC5.42□□□□□ -1.54
SSR1P43307 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.42□□□□□ -1.54
SSR1P43307 AC069307.1-201ENST00000602820 447 ntBASIC5.42□□□□□ -1.54
SSR1P43307 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.42□□□□□ -1.54
SSR1P43307 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.42□□□□□ -1.54
SSR1P43307 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.42□□□□□ -1.54
SSR1P43307 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSR1P43307 MTND4P26-201ENST00000415971 1359 ntBASIC5.42□□□□□ -1.54
SSR1P43307 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSR1P43307 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 AL451142.2-201ENST00000429076 2090 ntBASIC5.41□□□□□ -1.54
SSR1P43307 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 AC114947.2-201ENST00000565748 2125 ntBASIC5.41□□□□□ -1.54
SSR1P43307 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 AC013429.2-201ENST00000418798 781 ntBASIC5.41□□□□□ -1.54
SSR1P43307 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.41□□□□□ -1.54
SSR1P43307 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.41□□□□□ -1.54
SSR1P43307 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 RPS4XP1-201ENST00000482189 787 ntBASIC5.41□□□□□ -1.54
SSR1P43307 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 RPL7P51-201ENST00000490532 749 ntBASIC5.41□□□□□ -1.54
SSR1P43307 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 PRELID3BP7-201ENST00000503606 469 ntBASIC5.41□□□□□ -1.54
SSR1P43307 RPS4XP20-201ENST00000505751 772 ntBASIC5.41□□□□□ -1.54
SSR1P43307 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 RN7SKP46-201ENST00000515942 234 ntBASIC5.41□□□□□ -1.54
SSR1P43307 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.41□□□□□ -1.54
SSR1P43307 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.41□□□□□ -1.54
SSR1P43307 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.41□□□□□ -1.54
SSR1P43307 AC040958.1-201ENST00000561102 201 ntBASIC5.41□□□□□ -1.54
SSR1P43307 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SSR1P43307 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.41□□□□□ -1.54
SSR1P43307 AL161912.3-201ENST00000605404 628 ntBASIC5.41□□□□□ -1.54
SSR1P43307 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.41□□□□□ -1.54
SSR1P43307 AL049767.1-202ENST00000637826 242 ntBASIC5.41□□□□□ -1.54
SSR1P43307 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSR1P43307 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSR1P43307 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SSR1P43307 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSR1P43307 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSR1P43307 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.4□□□□□ -1.54
SSR1P43307 Z73965.1-201ENST00000623412 2297 ntBASIC5.4□□□□□ -1.54
SSR1P43307 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.4□□□□□ -1.54
SSR1P43307 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
SSR1P43307 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSR1P43307 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSR1P43307 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
SSR1P43307 AC017079.1-201ENST00000333650 415 ntBASIC5.4□□□□□ -1.54
SSR1P43307 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSR1P43307 RNA5SP28-201ENST00000363841 119 ntBASIC5.4□□□□□ -1.54
SSR1P43307 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms