Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HTTP42858 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HTTP42858 RNA5SP241-201ENST00000391326 114 ntBASIC5.06□□□□□ -1.6
HTTP42858 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.06□□□□□ -1.6
HTTP42858 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.06□□□□□ -1.6
HTTP42858 TRMT10BP1-201ENST00000519377 943 ntBASIC5.06□□□□□ -1.6
HTTP42858 OR8Q1P-201ENST00000526467 655 ntBASIC5.06□□□□□ -1.6
HTTP42858 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.06□□□□□ -1.6
HTTP42858 AL451086.1-201ENST00000605596 223 ntBASIC5.06□□□□□ -1.6
HTTP42858 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HTTP42858 U6.105-201ENST00000637379 88 ntBASIC5.06□□□□□ -1.6
HTTP42858 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.05□□□□□ -1.6
HTTP42858 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HTTP42858 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
HTTP42858 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 MT-RNR1-201ENST00000389680 954 ntBASIC5.05□□□□□ -1.6
HTTP42858 RPL21P65-201ENST00000406094 466 ntBASIC5.05□□□□□ -1.6
HTTP42858 QRSL1P2-201ENST00000418582 964 ntBASIC5.05□□□□□ -1.6
HTTP42858 AC099670.2-201ENST00000435130 321 ntBASIC5.05□□□□□ -1.6
HTTP42858 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.05□□□□□ -1.6
HTTP42858 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.05□□□□□ -1.6
HTTP42858 AL162574.1-201ENST00000615702 950 ntBASIC5.05□□□□□ -1.6
HTTP42858 AL445363.3-201ENST00000623080 671 ntBASIC5.05□□□□□ -1.6
HTTP42858 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 AC073342.2-201ENST00000595842 1800 ntBASIC5.05□□□□□ -1.6
HTTP42858 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HTTP42858 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.05□□□□□ -1.6
HTTP42858 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.05□□□□□ -1.6
HTTP42858 AC040958.1-201ENST00000561102 201 ntBASIC5.05□□□□□ -1.6
HTTP42858 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.05□□□□□ -1.6
HTTP42858 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.05□□□□□ -1.6
HTTP42858 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
HTTP42858 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HTTP42858 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HTTP42858 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 AL359265.1-201ENST00000440296 795 ntBASIC5.04□□□□□ -1.6
HTTP42858 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.04□□□□□ -1.6
HTTP42858 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.04□□□□□ -1.6
HTTP42858 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.04□□□□□ -1.6
HTTP42858 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 AC005899.7-201ENST00000618199 588 ntBASIC5.04□□□□□ -1.6
HTTP42858 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 Z98745.1-201ENST00000402553 494 ntBASIC5.04□□□□□ -1.6
HTTP42858 AL162151.2-201ENST00000448875 158 ntBASIC5.04□□□□□ -1.6
HTTP42858 PSAT1P4-201ENST00000466500 526 ntBASIC5.04□□□□□ -1.6
HTTP42858 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.04□□□□□ -1.6
HTTP42858 MTND4LP31-201ENST00000514859 294 ntBASIC5.04□□□□□ -1.6
HTTP42858 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.04□□□□□ -1.6
HTTP42858 FAM27D1-201ENST00000612308 341 ntBASIC5.04□□□□□ -1.6
HTTP42858 AL352984.2-202ENST00000613699 155 ntBASIC5.04□□□□□ -1.6
HTTP42858 AC005618.4-201ENST00000625053 554 ntBASIC5.04□□□□□ -1.6
HTTP42858 OR2L1P-202ENST00000641567 1023 ntBASIC5.04□□□□□ -1.6
HTTP42858 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HTTP42858 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.04□□□□□ -1.6
HTTP42858 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HTTP42858 CPHL1P-201ENST00000461341 3407 ntBASIC5.03□□□□□ -1.6
HTTP42858 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HTTP42858 MIR218-2-201ENST00000385006 110 ntBASIC5.03□□□□□ -1.6
HTTP42858 AL590399.2-201ENST00000427536 309 ntBASIC5.03□□□□□ -1.6
HTTP42858 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.03□□□□□ -1.6
HTTP42858 RPL7P33-201ENST00000444159 742 ntBASIC5.03□□□□□ -1.6
HTTP42858 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.03□□□□□ -1.6
HTTP42858 Y_RNA.719-201ENST00000517156 106 ntBASIC5.03□□□□□ -1.6
HTTP42858 MIR6891-201ENST00000618788 93 ntBASIC5.03□□□□□ -1.6
HTTP42858 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HTTP42858 TMEM30CP-203ENST00000637814 1035 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms