Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.83□□□□□ -1.48
CIITAP33076 AC027176.2-201ENST00000559166 746 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.83□□□□□ -1.48
CIITAP33076 MTND1P8-201ENST00000571424 950 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.83□□□□□ -1.48
CIITAP33076 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.83□□□□□ -1.48
CIITAP33076 AC067838.1-201ENST00000606064 577 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AL445222.1-201ENST00000607259 628 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC084036.1-201ENST00000609190 508 ntBASIC5.83□□□□□ -1.48
CIITAP33076 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.83□□□□□ -1.48
CIITAP33076 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CIITAP33076 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
CIITAP33076 HSPA8P18-201ENST00000439846 1928 ntBASIC5.83□□□□□ -1.48
CIITAP33076 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AP000473.2-201ENST00000602659 1537 ntBASIC5.83□□□□□ -1.48
CIITAP33076 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CIITAP33076 AP005432.1-201ENST00000580891 3485 ntBASIC5.83□□□□□ -1.48
CIITAP33076 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.82□□□□□ -1.48
CIITAP33076 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.82□□□□□ -1.48
CIITAP33076 MRRFP1-201ENST00000435941 1675 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CIITAP33076 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CIITAP33076 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 AL672167.2-201ENST00000377164 879 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AL645927.1-201ENST00000396783 406 ntBASIC5.82□□□□□ -1.48
CIITAP33076 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 AL445213.1-201ENST00000412589 747 ntBASIC5.82□□□□□ -1.48
CIITAP33076 VTI1BP4-201ENST00000427516 527 ntBASIC5.82□□□□□ -1.48
CIITAP33076 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 AC046176.1-201ENST00000435260 1170 ntBASIC5.82□□□□□ -1.48
CIITAP33076 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 PTMAP6-201ENST00000439110 327 ntBASIC5.82□□□□□ -1.48
CIITAP33076 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 AC073850.1-201ENST00000449243 255 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 AC105918.1-201ENST00000474399 838 ntBASIC5.82□□□□□ -1.48
CIITAP33076 OR11I1P-201ENST00000486033 954 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.82□□□□□ -1.48
CIITAP33076 SCARNA1-201ENST00000517138 166 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.82□□□□□ -1.48
CIITAP33076 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.82□□□□□ -1.48
CIITAP33076 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.82□□□□□ -1.48
CIITAP33076 AC022884.2-201ENST00000578535 580 ntBASIC5.82□□□□□ -1.48
CIITAP33076 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CIITAP33076 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CIITAP33076 AC087763.1-201ENST00000603391 286 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC120053.1-201ENST00000607706 736 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC018645.2-201ENST00000609151 472 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AL159169.2-201ENST00000610061 1269 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC108359.1-201ENST00000616451 1211 ntBASIC5.82□□□□□ -1.48
CIITAP33076 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 AL445493.3-201ENST00000619568 477 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC074276.2-201ENST00000619891 348 ntBASIC5.82□□□□□ -1.48
CIITAP33076 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CIITAP33076 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.82□□□□□ -1.48
CIITAP33076 AC073869.7-201ENST00000640874 297 ntBASIC5.82□□□□□ -1.48
CIITAP33076 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CIITAP33076 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.82□□□□□ -1.48
CIITAP33076 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 NXF4-202ENST00000416098 1465 ntBASIC5.82□□□□□ -1.48
CIITAP33076 AC083843.2-201ENST00000568248 6253 ntBASIC5.82□□□□□ -1.48
CIITAP33076 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CIITAP33076 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CIITAP33076 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CIITAP33076 CASC19-221ENST00000641309 1382 ntBASIC5.81□□□□□ -1.48
CIITAP33076 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CIITAP33076 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.81□□□□□ -1.48
CIITAP33076 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CIITAP33076 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CIITAP33076 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CIITAP33076 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CIITAP33076 RNA5SP223-201ENST00000365174 120 ntBASIC5.81□□□□□ -1.48
CIITAP33076 GCNT6-201ENST00000379591 934 ntBASIC5.81□□□□□ -1.48
CIITAP33076 SNORA70-201ENST00000384436 135 ntBASIC5.81□□□□□ -1.48
CIITAP33076 AL035405.1-201ENST00000400795 710 ntBASIC5.81□□□□□ -1.48
CIITAP33076 AL078599.1-201ENST00000402075 293 ntBASIC5.81□□□□□ -1.48
CIITAP33076 MGAT2P2-201ENST00000427194 797 ntBASIC5.81□□□□□ -1.48
CIITAP33076 HMGB3P10-201ENST00000434734 572 ntBASIC5.81□□□□□ -1.48
CIITAP33076 TXNP2-201ENST00000443918 295 ntBASIC5.81□□□□□ -1.48
CIITAP33076 RPL31P20-201ENST00000449593 360 ntBASIC5.81□□□□□ -1.48
CIITAP33076 CBX1P2-201ENST00000453841 458 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms