Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL358178.1-201ENST00000407698 397 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC099336.2-201ENST00000422457 254 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 EI24P4-201ENST00000423683 1078 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 NPM1P22-201ENST00000427761 952 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 OR52B5P-201ENST00000435337 951 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC099560.2-201ENST00000457554 255 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 RN7SL515P-201ENST00000463999 297 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC008410.1-201ENST00000483777 339 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 HIGD1AP14-201ENST00000507617 282 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 FABP5P6-201ENST00000510588 409 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC010503.3-201ENST00000594355 540 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 BNIP3P35-201ENST00000604530 490 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AP004372.1-201ENST00000604842 844 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 OR52B5P-202ENST00000641118 1110 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 OR5AC4P-202ENST00000642086 985 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AL590763.1-201ENST00000398297 1545 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HLA-DPA1P20036 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DPA1P20036 AP000756.2-201ENST00000624168 2567 ntBASIC5.21□□□□□ -1.57
HLA-DPA1P20036 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DPA1P20036 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 CASC19-221ENST00000641309 1382 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 MIR223-201ENST00000385204 110 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 MIR1178-201ENST00000408396 91 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 HSPE1P16-201ENST00000426640 348 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AL606490.7-201ENST00000433136 191 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 PTMAP3-201ENST00000447474 330 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AP002345.1-201ENST00000456493 928 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 RN7SL172P-201ENST00000460535 303 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC020779.1-201ENST00000478757 796 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 HMGB1P47-201ENST00000511281 589 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC100784.1-201ENST00000522790 310 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC006349.1-201ENST00000555526 235 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC068714.1-201ENST00000559623 800 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 SDR42E1P1-201ENST00000611327 477 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 FRG1EP-201ENST00000634469 770 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC119674.1-212ENST00000641155 993 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC092079.1-201ENST00000558620 1985 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 AC008079.2-201ENST00000623543 20396 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 SCARNA15-201ENST00000607520 4325 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 PANDAR-201ENST00000629595 1506 ntBASIC5.21□□□□□ -1.58
HLA-DPA1P20036 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DPA1P20036 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms