Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 SMG1P6-201ENST00000532337 2930 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 ZNF652P1-201ENST00000442420 1309 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 CIR1P2-201ENST00000514821 1342 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTLA4P16410 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
CTLA4P16410 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 AL359643.1-201ENST00000404109 423 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTLA4P16410 AC093162.1-201ENST00000419682 124 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 LINC00993-201ENST00000420453 540 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 FABP7P2-201ENST00000429946 379 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 OTX2P1-201ENST00000450956 354 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC104849.1-201ENST00000462623 405 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.26□□□□□ -1.73
CTLA4P16410 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.26□□□□□ -1.73
CTLA4P16410 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTLA4P16410 IGLV2-28-201ENST00000520681 304 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.26□□□□□ -1.73
CTLA4P16410 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CTLA4P16410 FKBP1BP1-201ENST00000553366 325 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 RN7SL753P-201ENST00000581238 290 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.26□□□□□ -1.73
CTLA4P16410 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.26□□□□□ -1.73
CTLA4P16410 AC020910.3-201ENST00000603701 874 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AP001521.2-201ENST00000608772 546 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AC007497.1-201ENST00000610421 561 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTLA4P16410 CR381572.2-201ENST00000624852 397 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 HSPA8P18-201ENST00000439846 1928 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 AL445487.1-201ENST00000415694 1580 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTLA4P16410 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.25□□□□□ -1.73
CTLA4P16410 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.25□□□□□ -1.73
CTLA4P16410 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 MTCO1P46-201ENST00000451639 1491 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.25□□□□□ -1.73
CTLA4P16410 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTLA4P16410 RNU1-83P-201ENST00000363426 164 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTLA4P16410 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 HMGB3P7-201ENST00000400214 611 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AL133268.1-201ENST00000405676 1401 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 MIR1178-201ENST00000408396 91 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 CHEK2P3-201ENST00000416118 248 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 BX510359.3-201ENST00000422168 306 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AL034379.1-201ENST00000423216 253 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AL645608.4-201ENST00000423619 154 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 TDGF1P1-201ENST00000445734 527 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 SLC25A18P1-201ENST00000449385 454 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 MYO5BP2-201ENST00000449815 1277 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AC234781.3-201ENST00000452540 973 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AC108751.2-201ENST00000469993 231 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 RPSAP50-201ENST00000481955 852 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.25□□□□□ -1.73
CTLA4P16410 AC004815.1-201ENST00000484185 331 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AC093763.2-201ENST00000505334 1223 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.25□□□□□ -1.73
CTLA4P16410 RN7SKP46-201ENST00000515942 234 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 RNU6-513P-201ENST00000516104 104 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 FTH1P11-201ENST00000517577 551 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.25□□□□□ -1.73
CTLA4P16410 MORF4L1P3-201ENST00000525966 950 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 GCSHP4-201ENST00000538792 439 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.25□□□□□ -1.73
CTLA4P16410 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.25□□□□□ -1.73
CTLA4P16410 AC019072.1-201ENST00000604535 1551 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 IMMP1LP1-201ENST00000605170 488 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AP002799.1-201ENST00000623552 423 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 AL603750.1-201ENST00000624216 1717 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.25□□□□□ -1.73
CTLA4P16410 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.25□□□□□ -1.73
CTLA4P16410 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
CTLA4P16410 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 MTCO1P15-201ENST00000529569 1526 ntBASIC4.25□□□□□ -1.73
CTLA4P16410 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.25□□□□□ -1.73
CTLA4P16410 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTLA4P16410 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CTLA4P16410 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTLA4P16410 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.25□□□□□ -1.73
CTLA4P16410 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.25□□□□□ -1.73
CTLA4P16410 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms