Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 RNA5SP509-201ENST00000364577 119 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.5□□□□□ -1.69
SPTA1P02549 RPL34P6-201ENST00000432390 345 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 CYCSP11-201ENST00000436426 315 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 HSFY6P-201ENST00000445573 403 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 RPS17P2-201ENST00000461663 408 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC4.5□□□□□ -1.69
SPTA1P02549 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.5□□□□□ -1.69
SPTA1P02549 AC025884.1-201ENST00000556034 378 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 RN7SL339P-201ENST00000580597 296 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SPTA1P02549 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.49□□□□□ -1.69
SPTA1P02549 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.49□□□□□ -1.69
SPTA1P02549 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.49□□□□□ -1.69
SPTA1P02549 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SPTA1P02549 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SPTA1P02549 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.49□□□□□ -1.69
SPTA1P02549 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SPTA1P02549 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SPTA1P02549 ARL4AP4-201ENST00000434170 518 ntBASIC4.49□□□□□ -1.69
SPTA1P02549 FHP1-201ENST00000442741 703 ntBASIC4.49□□□□□ -1.69
SPTA1P02549 AP003080.1-202ENST00000526526 915 ntBASIC4.49□□□□□ -1.69
SPTA1P02549 AC093014.1-201ENST00000548926 724 ntBASIC4.49□□□□□ -1.69
SPTA1P02549 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.49□□□□□ -1.69
SPTA1P02549 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.49□□□□□ -1.69
SPTA1P02549 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC4.49□□□□□ -1.69
SPTA1P02549 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.49□□□□□ -1.69
SPTA1P02549 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 RAD17P2-201ENST00000451754 1977 ntBASIC4.49□□□□□ -1.69
SPTA1P02549 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SPTA1P02549 OR5P1P-201ENST00000299512 925 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 SNORA63.1-201ENST00000362493 131 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SPTA1P02549 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 BOLA3P4-201ENST00000418151 400 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.48□□□□□ -1.69
SPTA1P02549 AL133372.1-201ENST00000493565 745 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.48□□□□□ -1.69
SPTA1P02549 KC877982.1-201ENST00000602313 470 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.48□□□□□ -1.69
SPTA1P02549 AL035461.2-201ENST00000619201 524 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 AP000843.1-201ENST00000624880 701 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.48□□□□□ -1.69
SPTA1P02549 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SPTA1P02549 OR9K1P-202ENST00000641111 3217 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SPTA1P02549 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 AC006427.1-201ENST00000514359 712 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.48□□□□□ -1.69
SPTA1P02549 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.48□□□□□ -1.69
SPTA1P02549 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 AC008739.3-201ENST00000603262 127 ntBASIC4.48□□□□□ -1.69
SPTA1P02549 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.48□□□□□ -1.69
SPTA1P02549 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
SPTA1P02549 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SPTA1P02549 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SPTA1P02549 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SPTA1P02549 AL731566.1-201ENST00000620490 1937 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.47□□□□□ -1.69
SPTA1P02549 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SPTA1P02549 ATP5F1P2-201ENST00000398143 760 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AC108751.3-201ENST00000461814 1020 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.47□□□□□ -1.69
SPTA1P02549 AC108738.1-201ENST00000603703 237 ntBASIC4.47□□□□□ -1.69
SPTA1P02549 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms