Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A1P02462 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A1P02462 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A1P02462 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL4A1P02462 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
COL4A1P02462 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A1P02462 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A1P02462 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.65□□□□□ -1.5
COL4A1P02462 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A1P02462 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A1P02462 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A1P02462 AP000580.1-201ENST00000404439 358 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.65□□□□□ -1.51
COL4A1P02462 DHFRP3-201ENST00000455595 559 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 AC090142.1-201ENST00000465776 462 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A1P02462 Y_RNA.719-201ENST00000517156 106 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 AC105031.1-201ENST00000518550 476 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.65□□□□□ -1.51
COL4A1P02462 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.65□□□□□ -1.51
COL4A1P02462 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.65□□□□□ -1.51
COL4A1P02462 AL133243.1-201ENST00000614487 366 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 SNX18P1Y-201ENST00000616231 511 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A1P02462 AP000756.2-201ENST00000624168 2567 ntBASIC5.65□□□□□ -1.51
COL4A1P02462 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A1P02462 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A1P02462 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A1P02462 AL034370.1-201ENST00000397254 1590 ntBASIC5.64□□□□□ -1.51
COL4A1P02462 AL391684.1-202ENST00000641293 1636 ntBASIC5.64□□□□□ -1.51
COL4A1P02462 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
COL4A1P02462 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A1P02462 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A1P02462 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL4A1P02462 MIR134-201ENST00000385258 73 ntBASIC5.64□□□□□ -1.51
COL4A1P02462 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A1P02462 H2AFZP5-201ENST00000446960 382 ntBASIC5.64□□□□□ -1.51
COL4A1P02462 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A1P02462 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A1P02462 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL4A1P02462 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL4A1P02462 SNORA37-201ENST00000384504 129 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 OR8G2P-201ENST00000412796 908 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A1P02462 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A1P02462 RPL7P32-201ENST00000457119 744 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A1P02462 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 IGKV2D-10-201ENST00000520194 281 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 NPM1P6-201ENST00000521088 871 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 ARF4P1-201ENST00000605447 541 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A1P02462 AC100778.3-201ENST00000580060 1750 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A1P02462 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL4A1P02462 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL4A1P02462 AC073342.2-201ENST00000595842 1800 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A1P02462 RNA5SP317-201ENST00000410176 116 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RNA5SP311-201ENST00000411290 116 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A1P02462 EIF4HP2-201ENST00000424380 563 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RPL5P2-201ENST00000429598 854 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RPS29P17-201ENST00000430795 166 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AC122718.1-201ENST00000439448 744 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 TDGF1P1-201ENST00000445734 527 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RN7SL98P-201ENST00000462271 300 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 FAM133DP-201ENST00000464802 691 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RPL7P19-201ENST00000469948 618 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A1P02462 RNA5SP315-201ENST00000516340 116 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RNA5SP312-201ENST00000517068 116 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A1P02462 AC021483.2-201ENST00000567415 758 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 RNF138P2-201ENST00000603490 592 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 AL139041.1-201ENST00000605480 610 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 OR8G7P-201ENST00000616658 848 ntBASIC5.63□□□□□ -1.51
COL4A1P02462 CPHL1P-201ENST00000461341 3407 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
COL4A1P02462 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A1P02462 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms