Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AP001642.1-201ENST00000624727 2117 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC017007.4-201ENST00000503353 1352 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 GAPDHP24-201ENST00000328713 983 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RNA5SP27-201ENST00000363839 119 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL035419.1-201ENST00000397037 564 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC073508.1-201ENST00000428866 656 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RPL34P6-201ENST00000432390 345 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC092809.1-201ENST00000441469 474 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 MRPL35P4-201ENST00000453682 566 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RPS4XP17-201ENST00000479057 754 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RN7SL346P-201ENST00000491561 294 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RPL23AP73-201ENST00000492507 471 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RPS24P16-201ENST00000497294 392 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL442163.2-201ENST00000553912 710 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC007956.1-201ENST00000555623 542 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AF186192.2-204ENST00000581667 524 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL122023.1-201ENST00000622847 530 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC024595.1-201ENST00000623088 387 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC073869.10-201ENST00000642016 354 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AL592182.3-201ENST00000642132 3304 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 AC009951.1-201ENST00000623674 2614 ntBASIC5.6□□□□□ -1.51
HMGB1P1B2RPK0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC083843.3-201ENST00000623679 2186 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC016716.1-201ENST00000265882 708 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MIR153-1-201ENST00000384914 90 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MRPL32P1-201ENST00000406301 247 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 RN7SKP29-201ENST00000410957 272 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 UBE2V1P11-201ENST00000411559 285 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 HMGB3P31-201ENST00000413333 595 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 RPSAP35-201ENST00000413753 818 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC007738.1-201ENST00000413892 348 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AL590762.3-201ENST00000436372 640 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 SNORA76.2-201ENST00000517095 137 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC010306.1-201ENST00000523223 1117 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC083923.1-201ENST00000523708 376 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC084121.1-201ENST00000533882 835 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 AC026826.3-201ENST00000561747 158 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.59□□□□□ -1.51
HMGB1P1B2RPK0 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms