Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 RPL23P2-201ENST00000320371 421 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 RNA5SP507-201ENST00000363603 121 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC023128.2-201ENST00000420880 1223 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 RPL23AP4-201ENST00000427757 463 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC092447.2-201ENST00000435487 669 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 FABP5P3-201ENST00000437960 408 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 FAR2P1-206ENST00000449736 709 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 HMGB1P44-201ENST00000508597 572 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 ST13P12-201ENST00000508958 1094 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 HMGN2P6-201ENST00000551091 273 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC010735.1-201ENST00000567305 1026 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AP004607.9-201ENST00000618202 316 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC006927.4-201ENST00000639187 543 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CASC19-222ENST00000641321 1173 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 AC026523.2-201ENST00000625039 7739 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 OR4F13P-202ENST00000560066 2054 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 ZNF733P-202ENST00000444809 1573 ntBASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
TBC1D3FA6NER0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RNU1-149P-201ENST00000390870 161 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RNA5SP339-201ENST00000390987 122 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RNU6-244P-201ENST00000391028 104 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RN7SKP279-201ENST00000411383 298 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RN7SKP273-201ENST00000411392 314 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RPSAP35-201ENST00000413753 818 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RPS27P18-201ENST00000431701 247 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AL035458.1-201ENST00000433096 585 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 ARF4P4-201ENST00000439608 520 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 RN7SL222P-201ENST00000476452 299 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 CYCSP41-201ENST00000616920 296 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC079776.5-201ENST00000641920 211 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 AC093671.1-201ENST00000624981 2929 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms