Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 NDUFA5P9-201ENST00000472609 340 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC118465.1-201ENST00000513820 1271 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 MTCYBP19-201ENST00000517463 1124 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 MRPS36P3-201ENST00000519284 130 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC122688.1-201ENST00000541494 223 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AP002906.1-201ENST00000603405 233 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC079610.2-201ENST00000604818 690 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC107952.2-201ENST00000606048 486 ntBASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PTPDC1A2A3K4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 HMGB1P13-201ENST00000406019 642 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 RNU4-22P-201ENST00000411058 166 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 RNF10P1-201ENST00000418589 369 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 BX510359.3-201ENST00000422168 306 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 MED28P3-201ENST00000444288 531 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 LINC02210-201ENST00000444561 288 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AL450996.1-201ENST00000445574 1202 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 RN7SL184P-201ENST00000488308 297 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC025459.1-201ENST00000504072 156 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 SNORA31.13-201ENST00000516624 135 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 IGKV2-18-201ENST00000522607 343 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 OR8I1P-201ENST00000529291 931 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC027026.1-201ENST00000532323 742 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 OSBPL9P5-201ENST00000542581 171 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC087897.1-201ENST00000550134 156 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC011611.5-201ENST00000552477 578 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 MTND4P33-201ENST00000556706 766 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 RBM22P12-201ENST00000567098 1255 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 MIR4311-201ENST00000580794 100 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC021171.1-201ENST00000603137 706 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC078883.4-201ENST00000623218 367 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 AC068137.4-201ENST00000638485 296 ntBASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPDC1A2A3K4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 SPATA2P1-201ENST00000431223 2055 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 NXF4-202ENST00000416098 1465 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 RNA5SP131-201ENST00000365452 119 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 RNA5SP105-201ENST00000391123 113 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 CHMP1B2P-201ENST00000399581 597 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 MTND4P3-201ENST00000417829 541 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 HMGB1P49-201ENST00000418882 569 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 RPA2P2-201ENST00000419698 796 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 USP9YP11-201ENST00000427537 717 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 AC084290.1-201ENST00000434995 374 ntBASIC6.54□□□□□ -1.36
PTPDC1A2A3K4 AC006335.2-201ENST00000437993 330 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms