Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC107954.1-201ENST00000565906 727 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC034268.2-201ENST00000571784 482 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 uc_338.21-201ENST00000622458 147 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AP006248.2-201ENST00000623309 592 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC093225.1-201ENST00000506867 1408 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-317P-201ENST00000384031 107 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 MIR128-2-201ENST00000384893 84 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL121972.1-201ENST00000402023 252 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU2-28P-201ENST00000410457 189 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC017035.1-201ENST00000411999 1115 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 FTOP1-201ENST00000419363 861 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC073069.1-201ENST00000428657 441 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SEPT14P3-201ENST00000439401 183 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 CXCR2P1-202ENST00000443392 1074 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL732372.2-207ENST00000445840 183 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ARPC3P5-201ENST00000448802 534 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SEPT14P2-201ENST00000453405 183 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 MTND6P2-201ENST00000512226 524 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SEPT14P4-201ENST00000513445 186 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 FO082796.1-201ENST00000523795 183 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC022690.1-201ENST00000526681 550 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC090424.1-201ENST00000535243 736 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC087257.2-201ENST00000538759 928 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC015801.1-201ENST00000585651 153 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC108451.2-201ENST00000603875 538 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL445222.1-201ENST00000607259 628 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL132765.2-201ENST00000610812 351 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 AL596275.2-208ENST00000641192 594 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 CASC19-221ENST00000641309 1382 ntBASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PCDHGA11Q9Y5H2 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms