Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 RNA5SP271-201ENST00000516700 88 ntBASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AP001804.2-201ENST00000533932 910 ntBASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC013283.1-201ENST00000557282 492 ntBASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AL080312.2-201ENST00000613001 630 ntBASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 RAD17P2-201ENST00000451754 1977 ntBASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ZC3H4Q9UPT8 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.09□□□□□ -1.12
ZC3H4Q9UPT8 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.09□□□□□ -1.12
ZC3H4Q9UPT8 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RPL21P132-201ENST00000331267 462 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RNU2-42P-201ENST00000410697 113 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 PTP4A1P1-201ENST00000420539 515 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AL161636.2-201ENST00000445179 927 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 VDAC2P4-201ENST00000452925 711 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC013828.1-201ENST00000481845 158 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 GAPDHP39-201ENST00000481866 979 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 PDLIM1P4-201ENST00000504327 1006 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RPL7L1P4-201ENST00000513004 707 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AP005597.2-201ENST00000526238 341 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC005084.1-201ENST00000605160 304 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC004890.3-201ENST00000605566 1095 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC055876.5-201ENST00000605667 259 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RPSAP75-201ENST00000605848 301 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 FAM27E2-201ENST00000619668 403 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AP000577.1-201ENST00000624366 878 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.08□□□□□ -1.12
ZC3H4Q9UPT8 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AC006026.1-201ENST00000444025 1803 ntBASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 SNORA70.3-201ENST00000365075 132 ntBASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AIMP1P1-201ENST00000418670 937 ntBASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AF228730.4-201ENST00000421457 183 ntBASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC8.07□□□□□ -1.12
ZC3H4Q9UPT8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms