Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL590635.1-201ENST00000406314 586 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MRPS21P5-201ENST00000417885 231 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 RAD23BP3-201ENST00000454157 1152 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 HMGN1P16-201ENST00000508308 283 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC104417.1-201ENST00000523974 751 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CTSLP2-201ENST00000580501 394 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC005726.4-201ENST00000582858 458 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC063977.7-201ENST00000594454 337 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 VN1R81P-201ENST00000602085 372 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC091133.5-201ENST00000603088 301 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL590032.1-201ENST00000604920 252 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 ACTR3BP1-201ENST00000605584 1247 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL132765.2-201ENST00000610812 351 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC004241.2-201ENST00000614562 444 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 uc_338.31-201ENST00000615595 186 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AC061999.1-201ENST00000624454 177 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 OR1S1-201ENST00000624470 978 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MTND5P3-201ENST00000438536 1800 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC107982.1-201ENST00000507171 1300 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC119674.1-204ENST00000641348 1343 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RACGAP1P-201ENST00000550663 1879 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC110716.2-201ENST00000563865 3945 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RNA5SP433-201ENST00000364491 114 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 Y_RNA.431-201ENST00000384086 102 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RNA5SP474-201ENST00000391234 90 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 TAF9BP2-201ENST00000400856 499 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 MTCO1P56-201ENST00000401674 224 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RPL5P18-201ENST00000406671 891 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RNU2-3P-201ENST00000410144 191 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RNA5SP431-201ENST00000410312 120 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ELOCP14-201ENST00000428070 331 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 MTCYBP45-201ENST00000435243 565 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ELOCP7-201ENST00000439968 331 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AL022237.1-201ENST00000446663 358 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 UBBP5-201ENST00000446970 266 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL216P-201ENST00000471607 298 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL561P-201ENST00000488553 281 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC114981.1-201ENST00000503897 678 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC112484.3-201ENST00000505910 329 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 HSPE1P23-201ENST00000509838 286 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 CYCSP1-201ENST00000604815 315 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC114477.1-201ENST00000605097 605 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AL513218.1-201ENST00000606527 391 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC015982.1-201ENST00000608113 465 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC105429.2-201ENST00000610567 517 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 MIR6721-201ENST00000617181 87 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 OR1N1-202ENST00000619659 939 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AL354718.1-201ENST00000619764 589 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC109454.4-201ENST00000623411 649 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 SNX18P10-201ENST00000625014 519 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms