Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 NXF4-202ENST00000416098 1465 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC112255.1-201ENST00000624070 2493 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 TBCAP2-201ENST00000416175 326 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 FABP7P1-201ENST00000424004 391 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 RPS27P18-201ENST00000431701 247 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 RPS26P2-201ENST00000440331 348 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC245047.2-201ENST00000441060 530 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC024558.1-201ENST00000505008 528 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 COX6B1P5-201ENST00000509843 249 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 RN7SKP260-201ENST00000516907 149 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 RNU6-709P-201ENST00000517257 104 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC018552.1-201ENST00000562099 811 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC015982.1-201ENST00000608113 465 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 SNORD91B-202ENST00000608459 222 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AL627230.1-201ENST00000613077 211 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AL591926.8-201ENST00000616876 211 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AL022401.1-201ENST00000619498 108 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC243960.7-201ENST00000623532 707 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 AC120338.1-201ENST00000625074 1541 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 Z95327.2-201ENST00000414579 1873 ntBASIC4.6□□□□□ -1.67
VAPAQ9P0L0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAPAQ9P0L0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 RNA5SP345-201ENST00000410646 108 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 RHOT1P3-201ENST00000436571 331 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 RPL7P39-201ENST00000481157 744 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 UBA52P7-201ENST00000486088 380 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 HMGN2P25-201ENST00000486956 268 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 RNA5SP392-201ENST00000516905 112 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 OR7E128P-201ENST00000532736 1024 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC079075.1-201ENST00000559543 878 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.59□□□□□ -1.67
VAPAQ9P0L0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.59□□□□□ -1.67
VAPAQ9P0L0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms