Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AGGF1P8-201ENST00000562979 1000 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 FKBP1AP1-201ENST00000594588 318 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 RN7SKP299-201ENST00000606679 301 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL355974.3-201ENST00000617383 467 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC015722.2-201ENST00000622210 551 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 RNA5SP211-201ENST00000365516 117 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 HMGB1P10-201ENST00000395823 563 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 XKRYP4-201ENST00000414395 483 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 NME1P1-201ENST00000420914 382 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 GTF2IP2-201ENST00000424290 697 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AL593851.1-201ENST00000426171 157 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 H2AFZP6-201ENST00000444403 394 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 XKRYP5-201ENST00000449659 483 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 NDUFA12P1-201ENST00000455914 406 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 BZW1P2-201ENST00000473537 826 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 SYPL1P1-201ENST00000473622 768 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 RN7SL30P-201ENST00000488416 306 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AL049872.1-201ENST00000556323 322 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC021483.2-201ENST00000567415 758 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC012254.4-201ENST00000588843 273 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 uc_338.26-201ENST00000612659 160 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 RMST_5.1-201ENST00000618704 126 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AL596275.2-208ENST00000641192 594 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 KARSP3-201ENST00000571212 1504 ntBASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDLIM7Q9NR12 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 AC092104.1-201ENST00000497346 1441 ntBASIC6.59□□□□□ -1.36
PDLIM7Q9NR12 MTND5P23-201ENST00000430812 1655 ntBASIC6.58□□□□□ -1.36
PDLIM7Q9NR12 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDLIM7Q9NR12 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDLIM7Q9NR12 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDLIM7Q9NR12 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms