Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC9.28□□□□□ -0.92
RTN4Q9NQC3 TTC41P-205ENST00000551270 3963 ntBASIC9.28□□□□□ -0.92
RTN4Q9NQC3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
RTN4Q9NQC3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
RTN4Q9NQC3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.92
RTN4Q9NQC3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 U3.11-201ENST00000364476 212 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 RNY3P13-201ENST00000365542 102 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AL354719.1-201ENST00000406535 843 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AL645936.2-201ENST00000430565 928 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 PMS2P10-201ENST00000447708 612 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 RPS27P20-201ENST00000492051 246 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 RNA5SP401-201ENST00000515920 127 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC087477.6-201ENST00000559595 843 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC013452.1-201ENST00000560630 598 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC090774.3-201ENST00000578666 742 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 VN1R80P-201ENST00000597126 338 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 SCGB2B3P-201ENST00000599388 409 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 uc_338.2-201ENST00000612963 182 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AL590099.1-201ENST00000615276 138 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 MIR7848-201ENST00000617402 101 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 MIR6785-201ENST00000618984 81 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AL161637.1-201ENST00000622380 412 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 AC024580.1-201ENST00000623020 674 ntBASIC9.27□□□□□ -0.93
RTN4Q9NQC3 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC9.27□□□□□ -0.93
RTN4Q9NQC3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 OR1S2-201ENST00000302592 978 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 Y_RNA.255-201ENST00000364581 97 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RN7SKP133-201ENST00000364845 340 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RNU4-48P-201ENST00000365559 182 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 SNORD51-201ENST00000384320 80 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 IFNA12P-201ENST00000413147 571 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 NCOR1P3-201ENST00000420479 303 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 CHIAP3-201ENST00000423668 1133 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RPS10P2-201ENST00000430953 494 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RPL23AP30-201ENST00000432419 501 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 RPS20P5-201ENST00000434808 360 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 FTH1P7-201ENST00000450676 552 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 AL353691.1-201ENST00000451332 387 ntBASIC9.26□□□□□ -0.93
RTN4Q9NQC3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RTN4Q9NQC3 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms