Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SS18L2P2-201ENST00000583960 235 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6□□□□□ -1.45
VPS11Q9H270 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6□□□□□ -1.45
VPS11Q9H270 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6□□□□□ -1.45
VPS11Q9H270 AC063977.7-201ENST00000594454 337 ntBASIC6□□□□□ -1.45
VPS11Q9H270 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6□□□□□ -1.45
VPS11Q9H270 AP000811.1-201ENST00000603803 651 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AC025449.1-201ENST00000603896 529 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AP000254.1-201ENST00000609934 520 ntBASIC6□□□□□ -1.45
VPS11Q9H270 MIR6774-201ENST00000614651 70 ntBASIC6□□□□□ -1.45
VPS11Q9H270 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AC018755.4-201ENST00000619715 454 ntBASIC6□□□□□ -1.45
VPS11Q9H270 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS11Q9H270 AL122023.1-201ENST00000622847 530 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AC073530.2-201ENST00000623987 261 ntBASIC6□□□□□ -1.45
VPS11Q9H270 AC103706.2-201ENST00000638080 240 ntBASIC6□□□□□ -1.45
VPS11Q9H270 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS11Q9H270 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS11Q9H270 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VPS11Q9H270 ECM1P2-201ENST00000503354 1577 ntBASIC6□□□□□ -1.45
VPS11Q9H270 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS11Q9H270 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VPS11Q9H270 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS11Q9H270 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
VPS11Q9H270 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VPS11Q9H270 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AL390237.1-201ENST00000404226 1415 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 RBPJP2-201ENST00000618187 1444 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC133552.1-201ENST00000569988 4007 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AP005432.1-201ENST00000580891 3485 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 ZNF876P-202ENST00000398732 1485 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS11Q9H270 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 RNU105B-201ENST00000364478 208 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RNU6-354P-201ENST00000383862 107 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RNU6-610P-201ENST00000384264 107 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RPS27AP11-201ENST00000402798 447 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RN7SKP279-201ENST00000411383 298 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 RPS7P8-201ENST00000418311 581 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 DPY19L1P2-201ENST00000426647 915 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 MTCO2P19-201ENST00000427513 598 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC099670.2-201ENST00000435130 321 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AL645936.1-201ENST00000441979 518 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 PPIAP32-201ENST00000449940 472 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 HMGB1P26-201ENST00000452520 628 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC092754.2-201ENST00000463506 460 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 CBX1P5-201ENST00000475330 559 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC080014.1-201ENST00000496877 1201 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 GLUD1P3-202ENST00000508551 200 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 IMPA1P1-201ENST00000510718 842 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC074087.1-201ENST00000512059 724 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 MTND2P26-201ENST00000528255 1029 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS11Q9H270 MTCO2P15-201ENST00000532655 656 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AP000916.1-201ENST00000533869 835 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC126615.2-201ENST00000553003 515 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC107982.3-201ENST00000584957 985 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC067852.7-201ENST00000623270 535 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC010435.1-201ENST00000623353 1177 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms