Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF29P-201ENST00000225587 168 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 RNU4-44P-201ENST00000363050 141 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RNA5SP433-201ENST00000364491 114 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 OR1L6-202ENST00000373684 1044 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 SUGT1P2-201ENST00000379452 992 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 HMGB3P19-201ENST00000403971 560 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC096533.1-201ENST00000411645 353 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL035660.1-201ENST00000422041 222 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC113412.1-201ENST00000425840 504 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RPL7AP49-201ENST00000429522 581 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL591438.1-201ENST00000433508 581 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 PTP4A1P3-201ENST00000433661 420 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RPL19P16-201ENST00000433839 588 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL157884.3-201ENST00000448273 1184 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 OR52E3P-201ENST00000452083 936 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RPL23AP23-201ENST00000452590 471 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 ACA64.1-201ENST00000459171 127 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC008379.1-201ENST00000463655 464 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RPS23P6-201ENST00000466136 431 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC008410.1-201ENST00000483777 339 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RN7SL170P-201ENST00000487098 295 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.11□□□□□ -1.75
VGLL1Q99990 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 OR5H3P-201ENST00000502817 919 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC020699.1-201ENST00000505161 445 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.11□□□□□ -1.75
VGLL1Q99990 SUMO2P5-201ENST00000506790 245 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 RN7SKP287-201ENST00000516546 266 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 MRPS16P1-201ENST00000523462 412 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AP001636.2-201ENST00000525517 696 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AP000648.1-201ENST00000529682 397 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 NPM1P35-201ENST00000533043 868 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 OR8G3P-201ENST00000533406 921 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC090022.1-201ENST00000546569 311 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC068305.2-201ENST00000550567 1205 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 MTND3P12-201ENST00000559068 328 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 NMNAT1P5-201ENST00000559657 841 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 DPPA2P4-201ENST00000563717 878 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 MIR4509-3-201ENST00000578671 94 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 MIR4509-2-201ENST00000583920 94 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC015802.2-201ENST00000589690 189 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 RPP40P2-201ENST00000603596 712 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AC005034.4-201ENST00000603612 899 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL031601.1-201ENST00000605702 394 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL592494.3-201ENST00000609485 464 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 MIR6780B-201ENST00000610307 79 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 MIR4509-1-201ENST00000618224 94 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 AL512427.1-201ENST00000618593 349 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 CU459211.1-201ENST00000635667 749 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC000374.1-201ENST00000434698 1745 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 NEPNP-201ENST00000404786 1371 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 BTBD10P1-201ENST00000549824 1352 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL450345.1-202ENST00000605741 3881 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 Z83820.1-201ENST00000456978 1499 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 AL731532.2-201ENST00000623542 1953 ntBASIC4.11□□□□□ -1.75
VGLL1Q99990 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.11□□□□□ -1.75
VGLL1Q99990 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.11□□□□□ -1.75
VGLL1Q99990 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VGLL1Q99990 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC116158.1-201ENST00000560231 2129 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms