Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL442067.2-201ENST00000614033 363 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC015908.5-201ENST00000623289 343 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC007998.4-201ENST00000612496 2533 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 OR5P1P-201ENST00000299512 925 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC011933.1-201ENST00000413334 321 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AL050321.1-201ENST00000432363 400 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC090804.1-201ENST00000448870 490 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC116533.1-201ENST00000459748 321 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 AC022360.1-201ENST00000521058 340 ntBASIC3.96□□□□□ -1.78
CSMD1Q96PZ7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC007688.1-201ENST00000475592 759 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 RN7SL558P-201ENST00000497468 299 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC027667.1-201ENST00000545814 304 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 MFSD8-236ENST00000641509 4050 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AL445584.1-201ENST00000431451 330 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 RPS7P7-201ENST00000463499 571 ntBASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CSMD1Q96PZ7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL121950.1-201ENST00000624993 2077 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC022336.1-201ENST00000475510 337 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 MTND4LP2-201ENST00000502312 285 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 MIR4286-201ENST00000580651 93 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 IPO5P1-202ENST00000600039 287 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL162574.1-201ENST00000615702 950 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL049794.2-201ENST00000616301 365 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC002525.1-201ENST00000624392 1622 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 MIR7-3-201ENST00000384898 110 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 DUX4L52-201ENST00000549363 777 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms