Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8□□□□□ -1.13
LRCH3Q96II8 AC083806.3-201ENST00000614016 455 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AC009318.4-201ENST00000620496 486 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AC211433.3-201ENST00000623770 375 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8□□□□□ -1.13
LRCH3Q96II8 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LRCH3Q96II8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LRCH3Q96II8 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 Z97832.2-201ENST00000605896 4261 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC032011.1-201ENST00000611703 1549 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 RNU6-216P-201ENST00000363282 104 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RN7SKP191-201ENST00000364713 306 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 Y_RNA.574-201ENST00000384766 95 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RNU6-316P-201ENST00000391027 107 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 SUMO2P13-201ENST00000403109 272 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL136116.1-201ENST00000403591 381 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RNA5SP280-201ENST00000411230 115 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC127391.1-201ENST00000411737 98 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 OR10T1P-201ENST00000424327 947 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 HIGD1AP8-201ENST00000453927 274 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 RPL23P10-201ENST00000468780 412 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 TRBV1-201ENST00000476502 284 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RN7SL70P-201ENST00000478322 302 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC104109.1-201ENST00000498563 436 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC022861.1-201ENST00000522981 663 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 SUB1P1-201ENST00000524415 382 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC090607.2-201ENST00000560331 695 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC026826.3-201ENST00000561747 158 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC026898.1-201ENST00000586404 571 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 RPS4XP21-201ENST00000603814 750 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC012368.3-201ENST00000604190 219 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL022345.1-201ENST00000607292 135 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL133173.2-201ENST00000614270 90 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 RN7SL680P-201ENST00000620379 299 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC231657.1-201ENST00000624313 397 ntBASIC7.99□□□□□ -1.13
LRCH3Q96II8 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LRCH3Q96II8 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.99□□□□□ -1.13
LRCH3Q96II8 AC008498.2-201ENST00000624033 2322 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.98□□□□□ -1.13
LRCH3Q96II8 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LRCH3Q96II8 AC016831.3-201ENST00000446451 1723 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 MAPK10-347ENST00000641762 2856 ntBASIC7.98□□□□□ -1.13
LRCH3Q96II8 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms