Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RN7SL356P-201ENST00000582228 248 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC012616.1-201ENST00000600294 197 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL118522.2-201ENST00000616045 615 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 MIR1264-201ENST00000616374 69 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC024023.1-201ENST00000624530 922 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC096656.1-201ENST00000623826 1364 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SMG1P6-201ENST00000532337 2930 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC083843.3-201ENST00000623679 2186 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 RNU2-17P-201ENST00000410290 190 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 YES1P1-201ENST00000418510 1628 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AL133173.1-201ENST00000423458 397 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 BX119904.1-201ENST00000432026 348 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 RPL34P6-201ENST00000432390 345 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC000374.1-201ENST00000434698 1745 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 NPM1P33-201ENST00000438918 872 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 NOP56P2-201ENST00000447491 769 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC005229.2-201ENST00000456995 399 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 IGKV2D-10-201ENST00000520194 281 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC022884.2-201ENST00000578535 580 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 MIR548Y-201ENST00000582739 110 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC010200.2-201ENST00000605098 235 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC109583.2-201ENST00000617367 129 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 AC129915.3-201ENST00000634128 948 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 TMEM30CP-203ENST00000637814 1035 ntBASIC5.1□□□□□ -1.59
VPS33AQ96AX1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS33AQ96AX1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC009229.4-201ENST00000623854 1947 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 BTBD10P1-201ENST00000549824 1352 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RNU4-44P-201ENST00000363050 141 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LYPLA1P3-201ENST00000402650 695 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 GAPDHP42-201ENST00000406848 981 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RPS3AP2-201ENST00000407190 754 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RPS4XP16-201ENST00000427198 791 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RPL12P17-201ENST00000432393 498 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 CLNS1AP1-201ENST00000435954 682 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AL450996.1-201ENST00000445574 1202 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC073909.1-201ENST00000447112 999 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC108161.1-201ENST00000461060 402 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC011476.1-201ENST00000466725 307 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RPL23AP12-201ENST00000467573 473 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms