Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RNU6-761P-201ENST00000384148 107 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AMZ2P2-201ENST00000406819 1057 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RN7SL290P-201ENST00000578661 300 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC015712.7-201ENST00000615211 635 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC009643.2-201ENST00000603543 1448 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL355596.1-201ENST00000565399 3996 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL161912.2-201ENST00000565707 3007 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL390316.1-201ENST00000406279 553 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 YME1L1P1-201ENST00000429435 297 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC084824.2-201ENST00000548906 345 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC024220.1-201ENST00000603675 484 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL121932.1-201ENST00000605542 214 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC126323.6-202ENST00000568092 3511 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 RPS12P10-201ENST00000427031 377 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC116562.1-201ENST00000485355 781 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC073358.1-201ENST00000505671 684 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ENPP7P11-201ENST00000505915 627 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 BUD31P1-201ENST00000521828 359 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC010547.7-201ENST00000570323 333 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL139254.3-201ENST00000641097 674 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 MAPK10-328ENST00000641553 4009 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC007382.1-201ENST00000624376 2618 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 MFSD8-242ENST00000641690 4199 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 NDUFB4P12-201ENST00000513465 390 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 AL022401.1-201ENST00000619498 108 ntBASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ALMS1Q8TCU4 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 RNU1-130P-201ENST00000363930 160 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 TRAV35-201ENST00000390462 330 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AL358176.3-201ENST00000420757 454 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AL132765.1-201ENST00000434165 553 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 VN1R105P-201ENST00000486595 910 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 NBPF8-201ENST00000583271 5330 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 DNM1P47-203ENST00000571780 12667 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms