Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SIMC1Q8NDZ2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIMC1Q8NDZ2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SIMC1Q8NDZ2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC016583.1-201ENST00000624221 2431 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC023490.2-201ENST00000359859 470 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL354890.1-201ENST00000413730 346 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 MFSD13B-201ENST00000420133 1290 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC130360.1-201ENST00000425489 1117 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 IGLV3-4-201ENST00000432300 244 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LYPLA1P1-201ENST00000434514 622 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ARF4P4-201ENST00000439608 520 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 DNAJA1P5-201ENST00000440278 943 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 SDC4P-201ENST00000453285 601 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC009963.3-201ENST00000458090 486 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC130365.2-201ENST00000525882 1201 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 NPM1P42-201ENST00000560329 862 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AP005119.1-201ENST00000580956 292 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC119403.2-201ENST00000590960 598 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC067773.1-201ENST00000603284 1094 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AL133507.1-201ENST00000605269 557 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AP002782.1-201ENST00000623107 614 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC138965.3-201ENST00000623875 498 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AC104966.1-201ENST00000467010 1464 ntBASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SIMC1Q8NDZ2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 METTL21EP-201ENST00000298105 713 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 OR10R3P-201ENST00000361688 942 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms