Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC079064.1-201ENST00000528365 362 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC022832.1-201ENST00000530718 645 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 HMGN2P6-201ENST00000551091 273 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC083837.1-201ENST00000565297 2994 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC122134.1-201ENST00000565664 1104 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AL158050.2-201ENST00000605336 568 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AL445222.1-201ENST00000607259 628 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC112503.2-201ENST00000609005 552 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AL139407.1-201ENST00000613826 1175 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AC074140.1-201ENST00000621617 208 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 CASC19-281ENST00000642118 1554 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 AL022311.1-201ENST00000623726 19416 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 SCARNA15-201ENST00000607520 4325 ntBASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN4BQ8IWT1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 TTC41P-205ENST00000551270 3963 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RN7SKP185-201ENST00000362813 326 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 HMGB3P7-201ENST00000400214 611 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RN7SKP213-201ENST00000410746 298 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RPL26P37-201ENST00000411983 438 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RPL23AP27-201ENST00000415161 451 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AL359265.1-201ENST00000440296 795 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 REG1CP-206ENST00000447469 496 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 RN7SL610P-201ENST00000463845 291 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC090058.1-201ENST00000498788 435 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC112518.2-201ENST00000508565 425 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 MTCO3P27-201ENST00000514397 196 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AP003080.1-202ENST00000526526 915 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC087888.1-201ENST00000550884 1254 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC025918.2-201ENST00000558683 763 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC021483.2-201ENST00000567415 758 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC245884.10-201ENST00000597355 337 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AF230666.2-201ENST00000602328 725 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC093388.1-201ENST00000609166 430 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC244107.2-201ENST00000611773 76 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC037198.3-201ENST00000616754 526 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AP003476.1-201ENST00000623984 516 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 Z95114.1-201ENST00000624264 14574 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4BQ8IWT1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms