Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 MRE11P1-201ENST00000464884 2127 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 RNU1-150P-201ENST00000362491 162 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SNORA64.1-201ENST00000362600 132 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 RNU4-7P-201ENST00000364758 141 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 OR1L6-202ENST00000373684 1044 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC004386.1-201ENST00000393214 761 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC023128.2-201ENST00000420880 1223 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC069154.1-201ENST00000432914 542 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 MTCYBP15-201ENST00000433123 1127 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 RPL19P16-201ENST00000433839 588 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 MTND1P26-201ENST00000440488 538 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC012512.1-201ENST00000446594 718 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 HSPE1P22-201ENST00000456856 327 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 PSMC1P13-201ENST00000458195 985 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 TPT1P1-201ENST00000458495 518 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 RNU6-276P-201ENST00000516114 96 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SCARNA20.4-201ENST00000516969 131 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 Y_RNA.717-201ENST00000517106 92 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC109635.6-201ENST00000525487 1113 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 NPM1P35-201ENST00000533043 868 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC127381.1-201ENST00000555979 939 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 PRPF19P1-201ENST00000584766 898 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 RN7SL622P-201ENST00000585292 275 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 BNIP3P32-201ENST00000600015 554 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC093673.2-201ENST00000609674 331 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AC073592.6-201ENST00000624271 415 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AL109659.3-201ENST00000624985 950 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SAMMSON-227ENST00000642114 1199 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 LINC01963-201ENST00000562038 3148 ntBASIC4.91□□□□□ -1.62
SHFQ7M4L6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SHFQ7M4L6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHFQ7M4L6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.9□□□□□ -1.62
SHFQ7M4L6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SHFQ7M4L6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SHFQ7M4L6 AC025574.1-201ENST00000554784 1653 ntBASIC4.9□□□□□ -1.62
SHFQ7M4L6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.9□□□□□ -1.62
SHFQ7M4L6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHFQ7M4L6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SHFQ7M4L6 ZNF29P-201ENST00000225587 168 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RNU1-65P-201ENST00000363919 148 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC007618.1-201ENST00000366455 732 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 MIR551A-201ENST00000385042 96 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 ZNF602P-201ENST00000405929 924 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RPL12P9-201ENST00000412942 488 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC007161.1-204ENST00000423039 460 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 HMGB3P5-201ENST00000428894 612 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RPL7AP49-201ENST00000429522 581 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms