Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC007938.2-201ENST00000604666 2634 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 RN7SKP69-201ENST00000365390 305 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 SNORD116-8-201ENST00000384365 95 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 MIR191-201ENST00000384873 92 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 GTF2IP2-201ENST00000424290 697 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 USP9YP11-201ENST00000427537 717 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC108479.1-201ENST00000431142 427 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL445928.1-201ENST00000435545 222 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC023141.8-201ENST00000442554 208 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 TRIM60P16-201ENST00000444048 694 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC068135.1-201ENST00000446164 246 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 PTENP1-201ENST00000447117 1215 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC092685.1-201ENST00000447960 1243 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC004129.2-201ENST00000457229 287 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 RPS27P20-201ENST00000492051 246 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 RPSAP51-201ENST00000497462 645 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC119751.1-201ENST00000513357 765 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC092593.2-201ENST00000513866 913 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 MAST4-IT1-201ENST00000514241 658 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC109635.6-201ENST00000525487 1113 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 OR5AK3P-201ENST00000527486 1297 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC027369.2-201ENST00000528030 440 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 DUXAP6-201ENST00000553858 601 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 ZNF92P3-201ENST00000596594 954 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC068768.2-201ENST00000602352 343 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC006363.1-201ENST00000603806 463 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC080013.6-201ENST00000606185 215 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC013468.1-201ENST00000608680 598 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC004943.3-201ENST00000624116 600 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC073488.3-201ENST00000631611 778 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 CASC19-281ENST00000642118 1554 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 MTND4P10-201ENST00000446199 1363 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 GNL2P1-201ENST00000451274 2190 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 PSG10P-201ENST00000501199 1500 ntBASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCHD4Q6ZW05 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD4Q6ZW05 AC017079.1-201ENST00000333650 415 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms