Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC004022.1-201ENST00000447766 1066 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AL354710.1-201ENST00000453641 246 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 CBX1P2-201ENST00000453841 458 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 RNU6-1218P-201ENST00000458990 108 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC096992.1-201ENST00000459808 709 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC124945.1-201ENST00000485133 188 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 NACAP5-201ENST00000509863 636 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 COX6B1P6-201ENST00000522347 255 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC009097.3-201ENST00000563557 1018 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MT1CP-201ENST00000567054 174 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AP005136.2-201ENST00000583253 1049 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AL020997.3-201ENST00000602843 359 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 Z99289.3-201ENST00000605586 594 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AL355493.4-201ENST00000618530 292 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC013470.4-201ENST00000619978 986 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AP002782.1-201ENST00000623107 614 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF220Q5VTB9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF220Q5VTB9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF220Q5VTB9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.59□□□□□ -1.52
RNF220Q5VTB9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF220Q5VTB9 AC000367.1-201ENST00000452711 1766 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 EIF3EP1-201ENST00000433978 1316 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RNA5SP375-201ENST00000362975 119 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MIR188-201ENST00000385034 86 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL079342.2-201ENST00000403367 482 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MYL6P5-201ENST00000412707 459 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 GTF2IP5-201ENST00000414608 731 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 OR4K6P-201ENST00000416478 897 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL356320.2-201ENST00000417263 507 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 HMGB1P49-201ENST00000418882 569 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 Z82198.3-201ENST00000421145 199 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RPL21P110-201ENST00000433345 446 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 UBE2V1P5-201ENST00000440070 405 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 TCEA1P3-201ENST00000443005 880 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 YWHAQP9-201ENST00000445891 512 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 NPM1P39-201ENST00000449818 867 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 TPMTP4-201ENST00000450749 678 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC243772.1-201ENST00000451620 410 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 MTCO2P6-201ENST00000463134 685 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RN7SL836P-201ENST00000476140 296 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 CCDC11P1-201ENST00000503137 1162 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 IGBP1P5-201ENST00000507524 1000 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 RNU6-416P-201ENST00000516265 103 ntBASIC5.58□□□□□ -1.52
RNF220Q5VTB9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF220Q5VTB9 AC078899.1-201ENST00000521432 1185 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms