Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC011487.3-201ENST00000593607 453 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AL671309.1-201ENST00000603750 544 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC016542.1-201ENST00000608259 493 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 FAM25E-202ENST00000608562 189 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AL592494.3-201ENST00000609485 464 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC015722.2-201ENST00000622210 551 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC099654.6-201ENST00000636487 512 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 NXF4-202ENST00000416098 1465 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AL356317.1-201ENST00000396110 1436 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AL121839.2-201ENST00000565058 6943 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC009501.3-201ENST00000605001 1352 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 RN7SKP216-201ENST00000411050 312 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 RPS6P14-201ENST00000425165 719 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 FABP7P2-201ENST00000429946 379 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AL161722.2-201ENST00000434731 981 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 Z99127.2-201ENST00000441426 334 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 KNOP1P3-201ENST00000446933 426 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 RPL31P44-201ENST00000447680 377 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 TRY2P-201ENST00000448860 689 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 EIF2S2P4-201ENST00000461070 984 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC083982.1-201ENST00000485679 344 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 HMGN2P25-201ENST00000486956 268 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC079064.1-201ENST00000528365 362 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 EDDM3DP-201ENST00000554692 434 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AL162431.4-201ENST00000604674 411 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
USP41Q3LFD5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP41Q3LFD5 AC079298.1-201ENST00000625026 1619 ntBASIC5.56□□□□□ -1.52
USP41Q3LFD5 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.55□□□□□ -1.52
USP41Q3LFD5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 SCARNA15-201ENST00000607520 4325 ntBASIC5.55□□□□□ -1.52
USP41Q3LFD5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 RNA5SP455-201ENST00000365190 119 ntBASIC5.55□□□□□ -1.52
USP41Q3LFD5 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.55□□□□□ -1.52
USP41Q3LFD5 HYALP1-201ENST00000417674 1279 ntBASIC5.55□□□□□ -1.52
USP41Q3LFD5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP41Q3LFD5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms