Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AL161912.3-201ENST00000605404 628 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AL158062.1-201ENST00000619632 745 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 MIR6758-201ENST00000620653 63 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 MIR7641-1-201ENST00000627518 61 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 BCORP1-203ENST00000513194 5093 ntBASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM1Q2M3G4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 FAM3C2-201ENST00000312214 681 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 MIR133A2-201ENST00000347538 102 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 RNU6-167P-201ENST00000384292 106 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 LRRC37BP1-201ENST00000398851 714 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 EI24P3-201ENST00000399046 1062 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AL021331.1-201ENST00000402817 582 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 RPS16P5-201ENST00000406501 404 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 NPM1P40-201ENST00000412758 733 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC009506.2-201ENST00000420635 840 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC000111.2-201ENST00000448200 210 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 RAB9BP1-201ENST00000519581 626 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AL512782.1-201ENST00000603093 364 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AP001521.2-201ENST00000608772 546 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHROOM1Q2M3G4 AL513548.1-201ENST00000562904 1724 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AL603750.1-201ENST00000624216 1717 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 SDAD1P1-202ENST00000524156 2051 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC092451.3-201ENST00000625067 1343 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AL132640.2-201ENST00000559968 1698 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 U3.30-201ENST00000391308 210 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 Z97832.1-201ENST00000402490 328 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AL136116.2-201ENST00000404020 785 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 CEACAMP6-201ENST00000452007 574 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC234781.3-201ENST00000452540 973 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC107015.1-201ENST00000466902 747 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 RN7SKP276-201ENST00000516242 268 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 C1GALT1P3-201ENST00000522049 819 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC022616.2-201ENST00000523185 300 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC122134.1-201ENST00000565664 1104 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 AC105105.5-201ENST00000622635 1294 ntBASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SHROOM1Q2M3G4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM1Q2M3G4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM1Q2M3G4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.78□□□□□ -1.48
SHROOM1Q2M3G4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
SHROOM1Q2M3G4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms