Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 MIR99A-201ENST00000384906 81 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 PDCL3P5-201ENST00000398028 722 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 TMSB4XP8-201ENST00000402089 135 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC109780.2-201ENST00000413467 845 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RPLP1P10-201ENST00000413972 339 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH1Q08174 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 TMSB4XP6-201ENST00000415187 135 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 NUP35P2-201ENST00000416748 943 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH1Q08174 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 TMSB4XP1-201ENST00000424567 135 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AC009518.3-201ENST00000438972 253 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDH1Q08174 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDH1Q08174 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH1Q08174 snoU109.1-201ENST00000459339 135 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RPS26P11-201ENST00000463445 348 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC021205.1-201ENST00000468797 348 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RPS26P6-201ENST00000475156 348 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RN7SL382P-201ENST00000482631 282 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RPL21P42-201ENST00000488408 464 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RN7SL561P-201ENST00000488553 281 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RN7SL518P-201ENST00000491887 280 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RN7SL187P-201ENST00000495587 303 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC063943.2-201ENST00000495697 534 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 MTND6P8-201ENST00000503471 522 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC048346.1-201ENST00000510247 144 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RNU6-358P-201ENST00000516564 75 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 RNU6-430P-201ENST00000517078 107 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 OR5M7P-201ENST00000526140 972 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 OR6M2P-201ENST00000529831 871 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AC011611.6-201ENST00000547483 255 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL138976.2-201ENST00000563989 694 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC092718.4-201ENST00000566639 716 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC136618.2-201ENST00000575091 400 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AP005119.2-201ENST00000579735 1105 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 SS18L2P2-201ENST00000583960 235 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC010487.1-201ENST00000594408 1172 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL136221.1-201ENST00000621449 509 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AL359880.1-201ENST00000621879 266 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AC112204.3-201ENST00000623822 332 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PCDH1Q08174 CYP1D1P-201ENST00000416662 1433 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 DCAF13P1-201ENST00000495256 1330 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 FUNDC2P3-201ENST00000334716 533 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 FAM32BP-201ENST00000344033 333 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 RNU4-7P-201ENST00000364758 141 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 Y_RNA.296-201ENST00000364930 108 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 RNU6-723P-201ENST00000383973 107 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 MT-TD-201ENST00000387419 68 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDH1Q08174 MTCO3P40-201ENST00000392516 676 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 RN7SKP268-201ENST00000411107 316 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH1Q08174 LINC00993-201ENST00000420453 540 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 RPS27AP14-201ENST00000422868 454 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 ELOCP14-201ENST00000428070 331 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 VDAC1P6-201ENST00000430062 855 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 RPS10P21-201ENST00000430654 475 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC073614.1-201ENST00000438690 650 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms